Factsheet for PGSC0003DMT400030553

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g009480.2.1	Tomato	cytosol	95.36	95.36
PGSC0003DMT400018400	Potato	extracellular	57.28	52.26
PGSC0003DMT400030589	Potato	extracellular	56.35	51.41
AT1G08310.2	Thale cress	cytosol	47.99	48.74
Bra018636.1-P	Field mustard	cytosol	47.68	48.12
CDX93573	Canola	cytosol	47.06	47.8
GSMUA_Achr10P...	Banana	cytosol	11.76	44.71
CDY31156	Canola	cytosol	44.27	43.47
Bra030720.1-P	Field mustard	nucleus	39.01	43.3
PGSC0003DMT400019164	Potato	extracellular, golgi	42.72	40.59
CDY30542	Canola	mitochondrion	48.3	40.52
CDX77121	Canola	mitochondrion	24.15	36.45
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	39.01	35.49
CDY32828	Canola	nucleus	45.82	35.49
CDY68993	Canola	plasma membrane	20.43	35.29
PGSC0003DMT400006848	Potato	plastid	39.01	34.05
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	35.6	33.72
CDX95073	Canola	golgi, vacuole	43.03	33.41
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	38.08	32.71
PGSC0003DMT400006849	Potato	mitochondrion, plastid	37.46	31.84
PGSC0003DMT400061634	Potato	plastid	40.25	31.71
Bra034356.1-P	Field mustard	mitochondrion	49.54	24.96
PGSC0003DMT400004379	Potato	cytosol	26.01	15.88
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	24.15	14.36
CDX77120	Canola	extracellular	14.24	12.81

Protein Annotations

EnsemblPlants:PGSC0003DMT400030553	EnsemblPlantsGene:PGSC0003DMG400011701	EntrezGene:102587803	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	PFAM:PF12697	PGSC:PGSC0003DMG400011701	RefSeq:XP_006365779.1
RefSeq:XP_015160074.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002959AD9	UniProt:M1AUE8	MapMan:35.2

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011701]

Coordinates

chr1:-:7293508..7297046

Molecular Weight (calculated)

37323.6 Da

IEP (calculated)

9.323

GRAVY (calculated)

-0.453

Length

323 amino acids

Sequence
(BLAST)

001: MVSAETKPNS SSNFKLIDGR KLSYKERGVP KEKSNYRIIF IHGFDSSKER DFLAPQELMN TMGVYIVQFD RAGYGGSDPN LKRSLRSEAS DIEELANHLE
101: LGSKFHIIGF SMGSYPTWSC IKHLSHRLAG VAFVVPIVNY QWPSLPESVL KDDERKKWYK RMTLVARYAP KLLHWWMIRK TSQSSSTDST KPTYFTDKDL
201: ELLKNAPGFQ FLTADKLKSR SVFNNLRSDF LVAFSKWDFD PLELSNPFPE NDKRPVHIWH GCEDRFINLK LQRHVSERLP WIQYHEVHDG GHLLIYDTAV
301: CEAILKSLLL GVDTPLYTPK FTS

Best Arabidopsis Sequence Match ( AT3G44510.2 )
(BLAST)

001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.