Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g007030.1.1 | Tomato | extracellular, mitochondrion | 92.39 | 77.91 |
| PGSC0003DMT400061634 | Potato | plastid | 86.48 | 74.88 |
| VIT_13s0106g00780.t01 | Wine grape | mitochondrion | 59.15 | 56.15 |
| KRH33274 | Soybean | extracellular, golgi, vacuole | 53.52 | 55.39 |
| PGSC0003DMT400006848 | Potato | plastid | 56.9 | 54.59 |
| PGSC0003DMT400060120 | Potato | extracellular, golgi, vacuole | 51.55 | 53.67 |
| PGSC0003DMT400006847 | Potato | golgi, mitochondrion, peroxisome, plastid | 54.37 | 51.33 |
| GSMUA_Achr11P... | Banana | mitochondrion | 53.52 | 51.21 |
| PGSC0003DMT400019164 | Potato | extracellular, golgi | 48.17 | 50.29 |
| PGSC0003DMT400006849 | Potato | mitochondrion, plastid | 52.96 | 49.47 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 47.32 | 48.84 |
| HORVU6Hr1G033060.1 | Barley | plastid | 50.7 | 48.78 |
| TraesCS6B01G191000.1 | Wheat | plastid | 50.42 | 48.51 |
| TraesCS6A01G160400.1 | Wheat | plastid | 50.42 | 48.25 |
| Os02t0532300-02 | Rice | plasma membrane | 50.42 | 48.12 |
| TraesCS6D01G152300.1 | Wheat | plastid | 50.14 | 47.98 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 49.01 | 47.8 |
| EES05176 | Sorghum | plastid | 49.3 | 47.68 |
| TraesCS2D01G292100.1 | Wheat | plastid | 48.17 | 47.5 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 47.89 | 47.22 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 46.48 | 47.14 |
| Bra014829.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 46.48 | 47.14 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 46.48 | 47.14 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 46.48 | 47.14 |
| TraesCS2A01G294400.1 | Wheat | plastid | 47.04 | 46.39 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 48.45 | 46.24 |
| EES04288 | Sorghum | extracellular | 45.63 | 45.0 |
| OQU81513 | Sorghum | cytosol | 25.92 | 44.88 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 47.89 | 44.85 |
| TraesCS1D01G269000.1 | Wheat | plastid | 45.63 | 44.14 |
| Os04t0412000-01 | Rice | plasma membrane | 47.32 | 42.86 |
| HORVU1Hr1G074380.4 | Barley | golgi | 43.66 | 42.23 |
| PGSC0003DMT400018400 | Potato | extracellular | 40.85 | 40.96 |
| Zm00001d003800_P011 | Maize | extracellular | 47.04 | 40.83 |
| TraesCS1A01G268900.1 | Wheat | plastid | 46.2 | 40.59 |
| PGSC0003DMT400030589 | Potato | extracellular | 40.0 | 40.11 |
| PGSC0003DMT400030553 | Potato | cytosol | 35.49 | 39.01 |
| EER89183 | Sorghum | cytosol | 25.35 | 31.58 |
| PGSC0003DMT400004379 | Potato | cytosol | 28.45 | 19.09 |
| PGSC0003DMT400070409 | Potato | cytosol, peroxisome, plastid | 26.76 | 17.5 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400061630 | EnsemblPlantsGene:PGSC0003DMG401023991 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF976 | PFAM:PF12697 | PGSC:PGSC0003DMG401023991 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000295806D | UniProt:M1C7T7 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401023991]
Coordinates
chr11:+:5279102..5282804
Molecular Weight (calculated)
40237.6 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.185
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTLCSGMLG KVLVVLLVSG LAWAFPALLP PPPRICGSPD GPTVTGPRIK LRYGRHLAYK EHGVPKETAK YKVVYAHSFG STRYESAIAS LETLEELGVY
101: VVSFDRPGYG ESDPHPKRTI QTTALDMEEL ADQLGLGPKF YVMGYSMGGH SVWGCLKYIP NRLAGAALVA PVVNYWWPSF PANLSTEGYN LQLTQDQWAL
201: RVAHYAPWLV YWWNTQKWFP YNSVLSGKLK MSPPDLEVVS RSAKHANEMQ KLKEYAVKQG VFESLHRDMM VGFGKWDFDP MDLKNLFSNG SIHLWHGDED
301: WVVPVILQRY VVERLPWINY HEIPNVGHLV MHDPAMKEVI WKTFLTGEKE QIVQS
101: VVSFDRPGYG ESDPHPKRTI QTTALDMEEL ADQLGLGPKF YVMGYSMGGH SVWGCLKYIP NRLAGAALVA PVVNYWWPSF PANLSTEGYN LQLTQDQWAL
201: RVAHYAPWLV YWWNTQKWFP YNSVLSGKLK MSPPDLEVVS RSAKHANEMQ KLKEYAVKQG VFESLHRDMM VGFGKWDFDP MDLKNLFSNG SIHLWHGDED
301: WVVPVILQRY VVERLPWINY HEIPNVGHLV MHDPAMKEVI WKTFLTGEKE QIVQS
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.