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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • extracellular 3
  • plastid 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89183 Sorghum cytosol 49.44 62.46
EES05176 Sorghum plastid 53.89 52.86
AT1G74300.1 Thale cress extracellular 49.72 51.73
AT2G36290.1 Thale cress plastid 49.72 49.18
Solyc09g009540.2.1 Tomato endoplasmic reticulum 48.61 49.02
KRH30836 Soybean mitochondrion, plastid 51.11 48.94
Solyc09g009500.2.1 Tomato plastid 50.28 48.92
Bra005286.1-P Field mustard plastid 49.17 48.76
Bra015923.1-P Field mustard endoplasmic reticulum, golgi 49.17 48.76
CDX75055 Canola plastid 49.17 48.76
CDX84140 Canola plastid 49.17 48.76
VIT_13s0106g00780.t01 Wine grape mitochondrion 50.56 48.66
Solyc09g009550.2.1 Tomato endoplasmic reticulum 46.94 48.56
CDX96530 Canola endoplasmic reticulum, golgi 48.89 48.48
PGSC0003DMT400006848 Potato plastid 49.72 48.38
CDX73073 Canola endoplasmic reticulum, golgi, mitochondrion, vacuole 48.33 48.33
OQU81513 Sorghum cytosol 27.22 47.8
KRH32735 Soybean endoplasmic reticulum 49.72 47.73
KRH33274 Soybean extracellular, golgi, vacuole 45.28 47.52
VIT_08s0007g03440.t01 Wine grape plastid 49.17 46.95
Solyc09g009520.2.1 Tomato plastid 48.61 46.54
KRG96190 Soybean extracellular, plasma membrane 37.22 46.53
KRH67906 Soybean golgi, plastid 47.78 46.49
EES10737 Sorghum endoplasmic reticulum, golgi, plastid, vacuole 48.61 46.17
PGSC0003DMT400006847 Potato golgi, mitochondrion, peroxisome, plastid 48.06 46.01
EES15681 Sorghum golgi, plasma membrane, vacuole 44.17 45.82
AT3G54240.1 Thale cress extracellular, golgi, vacuole 44.44 45.71
CDY65400 Canola endoplasmic reticulum, golgi, vacuole 44.44 45.71
PGSC0003DMT400061630 Potato endoplasmic reticulum, extracellular, golgi 45.0 45.63
AT1G74280.1 Thale cress golgi, mitochondrion 46.94 45.43
Bra014829.1-P Field mustard endoplasmic reticulum, golgi, vacuole 44.17 45.43
CDX76158 Canola endoplasmic reticulum, golgi, vacuole 44.17 45.43
Solyc09g009530.2.1 Tomato plastid 43.89 45.4
AT1G74290.1 Thale cress mitochondrion 46.67 45.28
PGSC0003DMT400060120 Potato extracellular, golgi, vacuole 41.94 44.28
Solyc07g024090.1.1 Tomato cytosol 15.0 43.9
Solyc05g055290.2.1 Tomato extracellular, golgi 41.94 43.52
PGSC0003DMT400006849 Potato mitochondrion, plastid 45.56 43.16
Solyc09g009510.2.1 Tomato plastid 45.56 43.16
Solyc11g007040.1.1 Tomato plastid 47.78 42.47
PGSC0003DMT400061634 Potato plastid 48.33 42.44
EER94632 Sorghum cytosol 42.22 41.64
Solyc11g007030.1.1 Tomato extracellular, mitochondrion 46.11 39.43
EES01786 Sorghum endoplasmic reticulum, extracellular 39.72 39.18
EER95643 Sorghum cytosol 39.17 38.52
CDX78221 Canola endoplasmic reticulum, extracellular, plasma membrane 12.5 37.82
EER94631 Sorghum plastid 40.83 36.3
VIT_03s0017g02230.t01 Wine grape cytosol 15.28 34.81
EER95045 Sorghum cytosol 28.33 19.17
Protein Annotations
EnsemblPlants:EES04288EnsemblPlantsGene:SORBI_3003G441100EntrezGene:8074127Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824
GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:IPR029058PANTHER:PTHR10992PANTHER:PTHR10992:SF976
PFAM:PF00561ProteinID:EES04288ProteinID:EES04288.1RefSeq:XP_002459168.1SEG:segSUPFAM:SSF53474
UniParc:UPI0001A85823UniProt:C5XJB2MapMan:35.2:::
Description
hypothetical protein
Coordinates
chr3:-:73991745..73994445
Molecular Weight (calculated)
40515.1 Da
IEP (calculated)
10.025
GRAVY (calculated)
-0.102
Length
360 amino acids
Sequence
(BLAST)
001: MMIARGFTTF RSMIDFEYAG ILKTALVLVL ASLLRLVYQR AIRPPPPRIC GAPGGPPVTA PRVRLRDGRH LAYLETGVPR AAATHKIVYI HGFDSCRHDV
101: LPVSPDLLRR LGACVVSYDR PGYGQSDPDP WQTERSSALD VQDLADQLGL GDRFHVVGFS RGGQIVWSCL AHIPHRLAGA VLVSPLANFW WRGFPGGVSS
201: RAFAAQLAQD RWAVSVARHA PWLVYWWNTQ RWFPPFSLIA RDRRVYSPPD MDVISKLAAG PRRRPYRAEV KQQGVFEALH RDMIMAFGKW DYSPLELGEK
301: EVAVHLWHGA DDRVVTPTMS RHIARQLPWI RYHEVPDAGH LFILADGMAD RIVKTLVLGD
Best Arabidopsis Sequence Match ( AT1G74300.1 )
(BLAST)
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.