CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES19854
OQU84787

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	EES19854	AT2G20130.1	21798944
AT3G09690.1	OQU84787	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047749_P001	Maize	cytosol	94.36	95.44
Zm00001d028727_P001	Maize	plasma membrane	94.17	94.0
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	83.65	83.02
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	82.89	82.58
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	82.52	82.52
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	82.33	81.87
Os12t0535400-01	Rice	cytosol, plasma membrane	21.24	70.19
HORVU4Hr1G056700.4	Barley	plastid	82.52	68.7
GSMUA_Achr6P33050_001	Banana	cytosol	59.59	63.02
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	58.08	60.59
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	55.26	58.1
VIT_06s0004g03310.t01	Wine grape	cytosol	53.01	57.43
KRG89038	Soybean	cytosol, golgi, plastid	50.0	54.85
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	55.26	54.14
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	54.7	53.79
CDY22195	Canola	cytosol, nucleus, plastid	52.07	53.47
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	52.07	53.27
CDY41305	Canola	cytosol, nucleus, plastid	52.07	53.27
CDY71255	Canola	cytosol	31.39	53.18
KRH32415	Soybean	endoplasmic reticulum	50.56	52.44
CDX70335	Canola	cytosol	51.88	52.37
AT5G02970.1	Thale cress	cytosol	50.56	52.33
Solyc09g007380.2.1	Tomato	cytosol	51.69	52.28
Bra009556.1-P	Field mustard	cytosol	51.69	52.18
KRH19822	Soybean	cytosol	49.81	51.96
AT3G09690.1	Thale cress	cytosol	51.32	51.8
CDY10412	Canola	cytosol	51.32	51.8
KRH24928	Soybean	golgi, peroxisome, plasma membrane	49.81	51.56
PGSC0003DMT400004379	Potato	cytosol	50.56	50.85
EES15681	Sorghum	golgi, plasma membrane, vacuole	20.49	31.41
EES04288	Sorghum	extracellular	19.17	28.33
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	20.11	28.23
EER94632	Sorghum	cytosol	19.36	28.22
EES01786	Sorghum	endoplasmic reticulum, extracellular	19.17	27.95
EES05176	Sorghum	plastid	19.17	27.79
EER95643	Sorghum	cytosol	18.23	26.5
EER94631	Sorghum	plastid	19.74	25.93
OQU81513	Sorghum	cytosol	8.46	21.95
EER89183	Sorghum	cytosol	9.59	17.89

Protein Annotations

EnsemblPlants:EER95045	EnsemblPlantsGene:SORBI_3001G408800	EntrezGene:8081441	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	PFAM:PF12697
ProteinID:EER95045	ProteinID:EER95045.1	RefSeq:XP_002468047.1	SEG:seg	SUPFAM:SSF53474	unigene:Sbi.20927
UniParc:UPI0001A83047	UniProt:C5WNK5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:69254678..69259714

Molecular Weight (calculated)

58539.5 Da

IEP (calculated)

5.531

GRAVY (calculated)

-0.259

Length

532 amino acids

Sequence
(BLAST)

001: MSAAATMTWH EDLATLVGDT GVRLPGGGGH APAAANVAAA GAGWYGEEEE GRAEEGWAQQ AKGFAESTAE MLRELGRGLW DVAAQSLAGA EDSELARRLR
101: KRAAATGKRL SFMNEYLPEE RDPVRCWLIV AAVAFVTLLV LGAGSDNETP VDLPKKLIIG PPSADRIQLP DGRHLAYEEQ GVSANRARFS LIAPHSFLSS
201: RLAGIPGISA SLLEEFGVRL VTYDLPGFGE SDPHLGRNLN SSALDMLYLA NALNIPEKFW VVGYSGGGMH AWSALRYIPD RVAGAAMFAP MANPYDSKMT
301: KDERRKTWDS WSTKRKLMHI LARRFPSLLP FFYRQTFLSG KQGQPESWLS LSLGKKDKTL LEGPVFNAFW ERNVAESVRQ GDARPFVEEA VLQVSDWGFS
401: LSDIQMQKKE ARGIFELIKS LFNQAEREWV GFLGPIHIWQ GMDDRVVSPS VAEFVRRSVP GATVHKLLDE GHFSYFCFCD ECHRQIFSTL FGIPQGPINP
501: APQPSEVVSE LTEETTVPDN ATDQEQGKSG LP

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.