Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P33050_001 | Banana | cytosol | 76.86 | 77.93 |
| VIT_06s0004g03310.t01 | Wine grape | cytosol | 57.25 | 59.47 |
| TraesCS4B01G196600.1 | Wheat | cytosol, nucleus, plasma membrane | 61.37 | 58.83 |
| TraesCS4D01G196900.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.57 | 58.8 |
| Zm00001d047749_P001 | Maize | cytosol | 60.59 | 58.75 |
| TraesCS4A01G108000.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.37 | 58.5 |
| Zm00001d028727_P001 | Maize | plasma membrane | 60.78 | 58.16 |
| EER95045 | Sorghum | cytosol | 60.59 | 58.08 |
| VIT_08s0040g02380.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 56.67 | 57.11 |
| Os03t0288300-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 59.8 | 56.9 |
| KRG89038 | Soybean | cytosol, golgi, plastid | 53.14 | 55.88 |
| Solyc09g007380.2.1 | Tomato | cytosol | 55.69 | 53.99 |
| KRH24928 | Soybean | golgi, peroxisome, plasma membrane | 53.73 | 53.31 |
| PGSC0003DMT400004379 | Potato | cytosol | 55.1 | 53.12 |
| KRH19822 | Soybean | cytosol | 52.94 | 52.94 |
| KRH32415 | Soybean | endoplasmic reticulum | 53.14 | 52.83 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 53.33 | 52.51 |
| Solyc11g072440.1.1 | Tomato | cytosol, peroxisome, plastid | 55.69 | 52.5 |
| PGSC0003DMT400070409 | Potato | cytosol, peroxisome, plastid | 55.69 | 52.3 |
| Bra034078.1-P | Field mustard | cytosol, nucleus, plastid | 52.94 | 51.92 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 52.94 | 51.92 |
| AT3G09690.1 | Thale cress | cytosol | 53.33 | 51.61 |
| CDY71255 | Canola | cytosol | 31.76 | 51.59 |
| AT5G02970.1 | Thale cress | cytosol | 51.57 | 51.17 |
| CDX70335 | Canola | cytosol | 52.55 | 50.85 |
| CDY10412 | Canola | cytosol | 52.35 | 50.66 |
| Bra009556.1-P | Field mustard | cytosol | 52.35 | 50.66 |
| HORVU4Hr1G056700.4 | Barley | plastid | 61.37 | 48.98 |
| Os12t0535400-01 | Rice | cytosol, plasma membrane | 15.29 | 48.45 |
| GSMUA_Achr10P... | Banana | cytosol | 4.71 | 28.24 |
| GSMUA_Achr11P... | Banana | cytosol | 11.18 | 28.22 |
| GSMUA_Achr11P... | Banana | cytosol | 12.16 | 27.31 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, plasma membrane | 19.02 | 27.09 |
| GSMUA_Achr11P... | Banana | mitochondrion | 18.82 | 25.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P04350_001 | EnsemblPlants:GSMUA_Achr9T04350_001 | EnsemblPlantsGene:GSMUA_Achr9G04350_001 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF994 | PFAM:PF00561 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0002962D8C |
| UniProt:M0TXE4 | MapMan:35.2 | : | : | : | : |
Description
hydrolase, alpha/beta fold family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G04350_001]
Coordinates
chr9:+:2891754..2900258
Molecular Weight (calculated)
57865.5 Da
IEP (calculated)
6.065
GRAVY (calculated)
-0.184
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFISFLLGK TQLGTSQAIV IIITCWYSFT WLDGAGPEES LKEQVTGFVV ATGEMLRELG RGFWDVAQQS LERVGETYVG KKVRGHWDAV LRRLEFMNEY
101: LPEDRDPVHA WPIVITVFLL ALLVLRVNNG NETSVEAPKK LYVSPPSASR IQLLDGRYMA YQEKGVLAER ARFFMIAPHA FLSSRLAGIP GIKESLLEEF
201: GVRLITYDLP GFGESDPHPV RNLNSSAMDM LHLANALGVT DKFWVVGYSG GAMHAWAAVH YIPDRLAGAA MFAPMSNPYD SSLNKEEIHK TWDEWTMKRR
301: LMYVLARRFP SLLPYFYRRS FLSGECGQPE KWLSLSLGKK DKSLLEEPVF REFWEKDAGE SVRQGDAKPF VEEALLQVSN WGFCLADLQV QNQHQGKGLL
401: PWLKSLYGRV EHEQAGFLGP IHVWQGMDDH VVPPSMTEFI RRMIPGATVH RLLGEGHFSY FCFCDDCHRQ IFSALFGNPR GPLSIELEVD RSPSEQHMED
501: IASHDCTELE
101: LPEDRDPVHA WPIVITVFLL ALLVLRVNNG NETSVEAPKK LYVSPPSASR IQLLDGRYMA YQEKGVLAER ARFFMIAPHA FLSSRLAGIP GIKESLLEEF
201: GVRLITYDLP GFGESDPHPV RNLNSSAMDM LHLANALGVT DKFWVVGYSG GAMHAWAAVH YIPDRLAGAA MFAPMSNPYD SSLNKEEIHK TWDEWTMKRR
301: LMYVLARRFP SLLPYFYRRS FLSGECGQPE KWLSLSLGKK DKSLLEEPVF REFWEKDAGE SVRQGDAKPF VEEALLQVSN WGFCLADLQV QNQHQGKGLL
401: PWLKSLYGRV EHEQAGFLGP IHVWQGMDDH VVPPSMTEFI RRMIPGATVH RLLGEGHFSY FCFCDDCHRQ IFSALFGNPR GPLSIELEVD RSPSEQHMED
501: IASHDCTELE
001: MEEMRRGVPT WQDELASLMD GGLQYDGSPI DLTADTESRS KSSGFESGSG SESVESLKDQ VTGFMKSWGE MLMDLAIGCK DVVQQMVVTD DSFVVRKLRK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.