Factsheet for VIT_08s0040g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_11s0016g03780.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	VIT_11s0016g03780.t01	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g03310.t01	Wine grape	cytosol	62.65	64.56
Solyc09g007380.2.1	Tomato	cytosol	65.61	63.12
KRH19822	Soybean	cytosol	63.44	62.94
KRH32415	Soybean	endoplasmic reticulum	63.44	62.57
PGSC0003DMT400004379	Potato	cytosol	64.23	61.44
GSMUA_Achr6P33050_001	Banana	cytosol	59.68	60.04
CDY71255	Canola	cytosol	36.56	58.92
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	60.08	58.46
AT5G02970.1	Thale cress	cytosol	58.89	57.98
CDY22195	Canola	cytosol, nucleus, plastid	59.29	57.92
CDY41305	Canola	cytosol, nucleus, plastid	59.49	57.88
AT3G09690.1	Thale cress	cytosol	60.28	57.87
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	57.11	56.67
CDY10412	Canola	cytosol	58.7	56.36
Bra009556.1-P	Field mustard	cytosol	58.7	56.36
CDX70335	Canola	cytosol	58.5	56.17
EER95045	Sorghum	cytosol	58.1	55.26
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	58.3	55.04
Zm00001d047749_P001	Maize	cytosol	56.52	54.37
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	57.11	54.32
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	57.11	54.12
Zm00001d028727_P001	Maize	plasma membrane	56.92	54.03
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	57.11	54.02
Os12t0535400-01	Rice	cytosol, plasma membrane	15.41	48.45
HORVU4Hr1G056700.4	Barley	plastid	56.92	45.07
VIT_15s0048g02060.t01	Wine grape	plastid	18.58	30.72
VIT_15s0048g02050.t01	Wine grape	cytosol	19.76	30.49
VIT_08s0007g03440.t01	Wine grape	plastid	21.54	28.91
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	19.96	28.69
VIT_06s0080g00310.t01	Wine grape	extracellular	19.37	27.92
VIT_13s0106g00780.t01	Wine grape	mitochondrion	20.55	27.81
VIT_06s0080g00330.t01	Wine grape	vacuole	17.79	25.86
VIT_03s0017g02230.t01	Wine grape	cytosol	5.93	18.99

Protein Annotations

EntrezGene:100248201	wikigene:100248201	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	ProteinID:CBI32693
ProteinID:CBI32693.3	UniProt:D7TQH3	EMBL:FN596008	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:IPR029058	EntrezGene:LOC100248201	wikigene:LOC100248201	PFAM:PF12697	PANTHER:PTHR10992	PANTHER:PTHR10992:SF994
SUPFAM:SSF53474	UniParc:UPI0001983D07	ArrayExpress:VIT_08s0040g02380	EnsemblPlantsGene:VIT_08s0040g02380	EnsemblPlants:VIT_08s0040g02380.t01	unigene:Vvi.23970
RefSeq:XP_002275070	RefSeq:XP_002275070.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:13449947..13458740

Molecular Weight (calculated)

57306.6 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.246

Length

506 amino acids

Sequence
(BLAST)

001: MSEVNGSRSW REELSLVDDT GYRYNTGSFE TRRSEFTVAG DSPEGETESL RDQVQGFLKA WGEIVVELGR GCRDIVQQSL VTEDSFIVKK LGGPCSKVGK
101: RLSFLNDYFL PEDRDPVHSW TVILLVFLIA FAVLSVNTKH DSSIPRIKKV CIHPPSASRV LLPDGRHMAY HELGVPADRA RFSLIAPHSF LSSRLAGIPG
201: IKAPLLEEFG VRLVAYDLPG FGESDPHPIR NLNSSALDML YLANTVGVND KFWVLGYSSG AMHAWAALRY IPDRIAGAAM FAPMVNLDER RMTKEERQKT
301: WEKWVTRRKL MYFLARRFPR LLTYFYRQSF LSGKHGPIDK WLAVSLGEKD KALVEEPHFE EFWHRDVEES IRQGNVKPFI EEAVLQVSNW GFSLADLQVQ
401: KKCPRKGILP WLKYMYSQAE CELTGFLRPI HIWQGMDDEV VPPPMTDYVS RILAGATVHK LPNEGHFSYF VFCDECHRQI LTTLFGSPQG PLNSTLDATD
501: SATATG

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.