Factsheet for VIT_06s0080g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00330.t01	Wine grape	vacuole	59.09	59.77
VIT_06s0080g00310.t01	Wine grape	extracellular	58.52	58.69
GSMUA_Achr10P...	Banana	cytosol	13.64	56.47
VIT_08s0007g03440.t01	Wine grape	plastid	57.1	53.32
VIT_13s0106g00780.t01	Wine grape	mitochondrion	55.97	52.67
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	12.5	51.16
VIT_03s0017g02230.t01	Wine grape	cytosol	21.88	48.73
VIT_15s0048g02060.t01	Wine grape	plastid	42.33	48.69
VIT_15s0048g02050.t01	Wine grape	cytosol	44.03	47.26
VIT_06s0004g03310.t01	Wine grape	cytosol	31.82	22.81
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	28.69	19.96

Protein Annotations

EntrezGene:100248360	wikigene:100248360	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CBI28331	ProteinID:CBI28331.3	UniProt:D7TCV8	EMBL:FN595757	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100248360	wikigene:LOC100248360	PFAM:PF12697	PANTHER:PTHR10992
PANTHER:PTHR10992:SF774	SUPFAM:SSF53474	SignalP:SignalP-noTM	TIGR:TC64122	UniParc:UPI0001BE2EA2	ArrayExpress:VIT_06s0080g00320
EnsemblPlantsGene:VIT_06s0080g00320	EnsemblPlants:VIT_06s0080g00320.t01	unigene:Vvi.14381	RefSeq:XP_002276591	RefSeq:XP_002276591.2	SEG:seg

Description

No Description!

Coordinates

chr6:+:20237712..20240465

Molecular Weight (calculated)

40233.6 Da

IEP (calculated)

7.744

GRAVY (calculated)

-0.227

Length

352 amino acids

Sequence
(BLAST)

001: MLAVAALVLG VGVLVWAYQA VTPPPPKICG SPNGPPVTSP RIKLSDGRYL AYKERGVPKE QAKYKVILVH GFDSSKDIYL PLSQDLIDEL GLYLVTYDRA
101: GYGESDPNPK RSVKSEAFDL QELADQLELG PKFHVIGISI GTYSIWACLK YIPHRLAGVA LVVPVINYWW LSFPSELFSK NYKKQLARDQ WKLGIAHYTP
201: GLTYWWLTQK WFPSSSILER HPIIFSKQDV EIIQTISKIP MPDEHKIRQQ GVYESLHRDI MVHFGKWDFD PMELKNPFPN NEGSVHLWQG HKDSLVPFEM
301: QRYLAQKLPW IQYHELPDSG HLIIHHNKLC EAIFRSLLLG EECSVSQNGV PH

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.