Factsheet for VIT_08s0007g03440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30836	Soybean	mitochondrion, plastid	73.21	73.4
VIT_13s0106g00780.t01	Wine grape	mitochondrion	71.88	72.46
Solyc09g009500.2.1	Tomato	plastid	71.09	72.43
KRH32735	Soybean	endoplasmic reticulum	71.35	71.73
PGSC0003DMT400006848	Potato	plastid	69.76	71.08
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	70.82	71.01
Solyc09g009520.2.1	Tomato	plastid	69.76	69.95
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	65.78	69.47
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	63.93	69.25
KRH67906	Soybean	golgi, plastid	67.37	68.65
VIT_03s0017g02230.t01	Wine grape	cytosol	28.38	67.72
Solyc09g009510.2.1	Tomato	plastid	67.64	67.11
PGSC0003DMT400006849	Potato	mitochondrion, plastid	67.11	66.58
GSMUA_Achr11P...	Banana	mitochondrion	65.25	66.31
Solyc09g009530.2.1	Tomato	plastid	60.74	65.8
KRG96190	Soybean	extracellular, plasma membrane	49.07	64.24
AT1G74300.1	Thale cress	extracellular	57.29	62.43
AT2G36290.1	Thale cress	plastid	60.21	62.36
Bra005286.1-P	Field mustard	plastid	59.68	61.98
CDX75055	Canola	plastid	59.42	61.71
CDX84140	Canola	plastid	58.62	60.88
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	57.03	59.72
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	57.29	59.5
HORVU6Hr1G033060.1	Barley	plastid	58.09	59.35
CDX96530	Canola	endoplasmic reticulum, golgi	57.03	59.23
AT1G74290.1	Thale cress	mitochondrion	57.56	58.49
AT1G74280.1	Thale cress	golgi, mitochondrion	57.03	57.8
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	55.17	57.78
TraesCS6B01G191000.1	Wheat	plastid	56.5	57.72
TraesCS2D01G292100.1	Wheat	plastid	54.64	57.22
TraesCS2A01G294400.1	Wheat	plastid	54.64	57.22
TraesCS6A01G160400.1	Wheat	plastid	56.23	57.14
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	53.32	57.1
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	51.99	56.98
TraesCS6D01G152300.1	Wheat	plastid	55.97	56.87
EES05176	Sorghum	plastid	53.58	55.04
Os02t0532300-02	Rice	plasma membrane	54.11	54.84
Zm00001d016696_P002	Maize	extracellular, plasma membrane	52.79	54.67
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	53.58	54.3
VIT_15s0048g02060.t01	Wine grape	plastid	44.03	54.25
VIT_06s0080g00310.t01	Wine grape	extracellular	50.4	54.13
VIT_15s0048g02050.t01	Wine grape	cytosol	46.42	53.35
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	53.58	53.3
TraesCS1D01G269000.1	Wheat	plastid	50.93	52.32
OQU81513	Sorghum	cytosol	28.12	51.71
VIT_06s0080g00330.t01	Wine grape	vacuole	47.48	51.44
HORVU1Hr1G074380.4	Barley	golgi	48.81	50.14
Os04t0412000-01	Rice	plasma membrane	51.99	50.0
EES04288	Sorghum	extracellular	46.95	49.17
Zm00001d003800_P011	Maize	extracellular	53.32	49.14
TraesCS1A01G268900.1	Wheat	plastid	51.46	48.02
EER89183	Sorghum	cytosol	25.73	34.04
VIT_06s0004g03310.t01	Wine grape	cytosol	28.91	22.2
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	28.91	21.54

Protein Annotations

EntrezGene:100263058	wikigene:100263058	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EMBL:AM460975	ProteinID:CAN65703	ProteinID:CAN65703.1	ProteinID:CBI30286	ProteinID:CBI30286.3	UniProt:D7TJ60
EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100263058
wikigene:LOC100263058	PFAM:PF12697	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	SUPFAM:SSF53474	TIGR:TC66812
TMHMM:TMhelix	UniParc:UPI00015CA0C6	ArrayExpress:VIT_08s0007g03440	EnsemblPlantsGene:VIT_08s0007g03440	EnsemblPlants:VIT_08s0007g03440.t01	RefSeq:XP_002282804
RefSeq:XP_002282804.2	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:17384323..17389168

Molecular Weight (calculated)

42780.3 Da

IEP (calculated)

9.078

GRAVY (calculated)

-0.331

Length

377 amino acids

Sequence
(BLAST)

001: MAGGVNRKIS AASARAHTRK SRQSSSFRLP SGMFKKILVV LLMGFLAWAY QAIQSPPPKI CGSPDGPPVT ASRIKLSDGR HLAYKEHGIP KDRAKYKIVY
101: VHGFDSCRHD VVVATSLSPE IVEELGIYIV SFDRPGYGES DPNPKRTVKS IPLDIEELAD QLGLGSKFYV IGFSMGGQVI WSCLKYIPHR LAGATLIAPV
201: VNYWWPSFPA NLSKEAYYQQ FRQDQWTLRV AHYTPWLTYW WNTQKWFPAS SVAEHSTDIL SHQDKELMLT KLSKRKEYMA QVRQQGEFES IHRDLMIGFG
301: TWEFDPMDLK NPFPNNEGSV HLWHGDEDAM VPVSLQRYIA QQLPWIQYHE VPGAGHLFPY AEGRTDAIIK ALLTGEK

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.