CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 3
golgi 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96190	Soybean	extracellular, plasma membrane	69.46	89.24
KRH32735	Soybean	endoplasmic reticulum	75.41	74.4
KRH30836	Soybean	mitochondrion, plastid	74.59	73.4
VIT_08s0007g03440.t01	Wine grape	plastid	68.65	67.37
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	61.62	65.52
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	65.14	64.1
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	60.54	62.75
Solyc09g009500.2.1	Tomato	plastid	62.16	62.16
Solyc09g009520.2.1	Tomato	plastid	62.97	61.97
Solyc09g009530.2.1	Tomato	plastid	58.11	61.78
PGSC0003DMT400006848	Potato	plastid	61.35	61.35
KRH33274	Soybean	extracellular, golgi, vacuole	55.95	60.35
Solyc09g009510.2.1	Tomato	plastid	61.62	60.0
AT2G36290.1	Thale cress	plastid	58.92	59.89
GSMUA_Achr11P...	Banana	mitochondrion	60.0	59.84
AT1G74300.1	Thale cress	extracellular	55.95	59.83
Bra005286.1-P	Field mustard	plastid	58.11	59.23
CDX75055	Canola	plastid	58.11	59.23
PGSC0003DMT400006849	Potato	mitochondrion, plastid	60.81	59.21
CDX84140	Canola	plastid	57.3	58.4
AT1G74290.1	Thale cress	mitochondrion	57.03	56.87
CDX96530	Canola	endoplasmic reticulum, golgi	55.68	56.75
AT1G74280.1	Thale cress	golgi, mitochondrion	57.03	56.72
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	55.41	56.47
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	54.59	56.11
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	51.62	55.52
HORVU6Hr1G033060.1	Barley	plastid	55.14	55.28
TraesCS6B01G191000.1	Wheat	plastid	53.78	53.93
TraesCS2D01G292100.1	Wheat	plastid	52.43	53.89
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	52.16	53.61
TraesCS2A01G294400.1	Wheat	plastid	52.16	53.61
Os02t0532300-02	Rice	plasma membrane	53.78	53.49
TraesCS6D01G152300.1	Wheat	plastid	53.51	53.37
TraesCS6A01G160400.1	Wheat	plastid	53.51	53.37
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	54.05	52.77
EES05176	Sorghum	plastid	51.89	52.32
Zm00001d016696_P002	Maize	extracellular, plasma membrane	51.35	52.2
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	47.03	51.79
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	51.62	51.34
TraesCS1D01G269000.1	Wheat	plastid	50.54	50.95
KRH17703	Soybean	cytosol	16.22	50.0
VIT_03s0017g02230.t01	Wine grape	cytosol	21.35	50.0
OQU81513	Sorghum	cytosol	27.57	49.76
Os04t0412000-01	Rice	plasma membrane	52.7	49.74
HORVU1Hr1G074380.4	Barley	golgi	48.38	48.77
EES04288	Sorghum	extracellular	46.49	47.78
Zm00001d003800_P011	Maize	extracellular	50.81	45.97
KRH30441	Soybean	cytosol	30.54	45.94
TraesCS1A01G268900.1	Wheat	plastid	49.73	45.54
KRH25210	Soybean	cytosol	42.43	44.23
KRH33263	Soybean	extracellular, golgi	32.7	39.03
EER89183	Sorghum	cytosol	25.95	33.68
KRG89038	Soybean	cytosol, golgi, plastid	25.14	19.18
KRH32415	Soybean	endoplasmic reticulum	25.95	18.71
KRH24928	Soybean	golgi, peroxisome, plasma membrane	25.41	18.29
KRH19822	Soybean	cytosol	25.14	18.24

Protein Annotations

EntrezGene:100776687	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02002089
EnsemblPlantsGene:GLYMA_03G194800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	UniProt:I1JQ12	InterPro:IPR029058	EnsemblPlants:KRH67906	ProteinID:KRH67906	ProteinID:KRH67906.1
PFAM:PF12697	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000233960E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40528420..40533920

Molecular Weight (calculated)

41755.1 Da

IEP (calculated)

8.440

GRAVY (calculated)

-0.194

Length

370 amino acids

Sequence
(BLAST)

001: MGVVNRRNSA AHTSNQNKTT SIQLPLGIFG TVLAVLFIGF VAWSYQTIQP PPPKICGSLN GPTITAPRIK LRDGRNLAYK EHGVPKDVAK HKIIFVHGFD
101: ACRHDAYVAK TLSPDVAEVL GVYIVSFDRP GYGESDPHPN QTVKSLALDI EELTDKLGLG SKFYIIGFSL GGQVVWRCLK YIPHRLAGAV LIAPVLNYWW
201: AGLPANLTNE VFYQQKLQDQ WTVRVAHYIP WLTYWWNTQK WFPSSSLIAD SIDLLSLQDR ELLPKRSDRK NHVAQVRQQG EHETVHRDLI LAFGSWEFSP
301: LDLENPFPNN EGSVHIWQGD EDLIVPVKVQ RYIAQKLPWI QYHELQGAGH LFPHVDGMSD TIIKSLLSGK

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.