CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH39309
KRH48364

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	KRH39309	AT2G20130.1	21798944
AT3G09690.1	KRH48364	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32415	Soybean	endoplasmic reticulum	92.16	91.62
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	62.94	63.44
Solyc09g007380.2.1	Tomato	cytosol	59.22	57.41
AT5G02970.1	Thale cress	cytosol	57.84	57.39
KRG89038	Soybean	cytosol, golgi, plastid	54.51	57.32
GSMUA_Achr6P33050_001	Banana	cytosol	56.27	57.06
AT3G09690.1	Thale cress	cytosol	58.43	56.55
CDY71255	Canola	cytosol	34.71	56.37
CDX70335	Canola	cytosol	57.84	55.98
PGSC0003DMT400004379	Potato	cytosol	58.04	55.95
CDY10412	Canola	cytosol	57.65	55.79
Bra009556.1-P	Field mustard	cytosol	57.65	55.79
CDY22195	Canola	cytosol, nucleus, plastid	56.47	55.6
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	56.27	55.19
CDY41305	Canola	cytosol, nucleus, plastid	56.08	55.0
KRH24928	Soybean	golgi, peroxisome, plasma membrane	54.71	54.28
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	52.94	52.94
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	53.14	50.56
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	52.16	50.0
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	52.35	50.0
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	52.35	49.91
EER95045	Sorghum	cytosol	51.96	49.81
Zm00001d047749_P001	Maize	cytosol	51.18	49.62
Zm00001d028727_P001	Maize	plasma membrane	50.39	48.22
HORVU4Hr1G056700.4	Barley	plastid	51.96	41.47
Os12t0535400-01	Rice	cytosol, plasma membrane	12.94	40.99
KRH17703	Soybean	cytosol	8.43	35.83
KRH25210	Soybean	cytosol	20.98	30.14
KRH30441	Soybean	cytosol	13.73	28.46
KRH33274	Soybean	extracellular, golgi, vacuole	17.84	26.53
KRH30836	Soybean	mitochondrion, plastid	19.41	26.33
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	17.25	26.19
KRH32735	Soybean	endoplasmic reticulum	18.82	25.6
KRH67906	Soybean	golgi, plastid	18.24	25.14
KRH33263	Soybean	extracellular, golgi	14.9	24.52
KRG96190	Soybean	extracellular, plasma membrane	13.33	23.61

Protein Annotations

EntrezGene:100781919	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02008209
EnsemblPlantsGene:GLYMA_13G137300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	UniProt:I1LZ13	InterPro:IPR029058	ProteinID:KRH19821.1	EnsemblPlants:KRH19822	ProteinID:KRH19822
ProteinID:KRH19822.1	ProteinID:KRH19823.1	PFAM:PF00561	PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	SUPFAM:SSF53474
TMHMM:TMhelix	UniParc:UPI000233AC51	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:25015222..25020991

Molecular Weight (calculated)

58336.0 Da

IEP (calculated)

5.988

GRAVY (calculated)

-0.286

Length

510 amino acids

Sequence
(BLAST)

001: MAEVRGRDTW TEELASLIED SGVRYGGDSP PTSFEVHAPQ SESGESLKEQ ALGFVMAWCE ILMELGRGFR DILRQNLINE DSYVVRKFGG PCSKVSKRLR
101: FLNDFLPEDR DPFHAWSVVF FVFILALAAI SVDPNREAVA PVVKVRQHPP SASRVLLPDG RYMAYHEQGV LADTARFSLV APHSFLSSRL AGLPGVKASL
201: LEEYGIRLVT YDLPGFGESD PHPNRNLNSS AMDVLHLVNA VNVTDKFWIL CHSSGCIHAW ASLRYIPEKI AGAAMLAPMI NPYDPHMTKE EMKRTWEKWL
301: PRRKMMYSLA RRFPKLLSFF YRKSFLPEQH DEIDKLLSVS PGKKDKLVTE EPEFEEFWQR DVEESVRQGN IRPFIEEAVL QVSNWGFDIK ELHVQKKCQT
401: RGILLWLKSM YSQAGCELAG FLGLKHIWQG LDDRVVPPSM MEYIERVLPE AVIHKLPNEG HFSYFYLCDQ CHRQIFTTLF GTPQGPVERQ EETATAFEEE
501: DKEEVLQVPV

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.