Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G09690.1 | CDY05723 | AT2G20130.1 | 21798944 |
| AT3G09690.1 | CDY31990 | AT2G20130.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71255 | Canola | cytosol | 60.62 | 100.0 |
| Bra034078.1-P | Field mustard | cytosol, nucleus, plastid | 98.46 | 98.08 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 98.26 | 97.88 |
| AT3G09690.1 | Thale cress | cytosol | 82.82 | 81.4 |
| CDX70335 | Canola | cytosol | 72.78 | 71.54 |
| CDY10412 | Canola | cytosol | 72.01 | 70.78 |
| VIT_08s0040g02380.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 57.92 | 59.29 |
| KRH19822 | Soybean | cytosol | 55.6 | 56.47 |
| KRH32415 | Soybean | endoplasmic reticulum | 55.79 | 56.34 |
| GSMUA_Achr6P33050_001 | Banana | cytosol | 54.44 | 56.06 |
| Solyc09g007380.2.1 | Tomato | cytosol | 54.44 | 53.61 |
| PGSC0003DMT400004379 | Potato | cytosol | 54.63 | 53.5 |
| GSMUA_Achr9P04350_001 | Banana | endoplasmic reticulum, extracellular, golgi | 52.51 | 53.33 |
| Zm00001d047749_P001 | Maize | cytosol | 53.47 | 52.66 |
| EER95045 | Sorghum | cytosol | 53.47 | 52.07 |
| Zm00001d028727_P001 | Maize | plasma membrane | 53.09 | 51.59 |
| TraesCS4B01G196600.1 | Wheat | cytosol, nucleus, plasma membrane | 52.9 | 51.5 |
| TraesCS4D01G196900.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.09 | 51.5 |
| Os03t0288300-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 52.9 | 51.12 |
| TraesCS4A01G108000.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.7 | 51.03 |
| Os12t0535400-01 | Rice | cytosol, plasma membrane | 13.71 | 44.1 |
| HORVU4Hr1G056700.4 | Barley | plastid | 52.7 | 42.72 |
| CDY70769 | Canola | cytosol | 9.65 | 40.0 |
| CDY72669 | Canola | cytosol | 9.46 | 39.2 |
| CDX71001 | Canola | extracellular | 12.55 | 29.95 |
| CDY49719 | Canola | extracellular | 18.73 | 28.28 |
| CDY60542 | Canola | cytosol | 17.37 | 27.44 |
| CDX93573 | Canola | cytosol | 16.8 | 27.36 |
| CDY09141 | Canola | endoplasmic reticulum, golgi | 17.76 | 26.98 |
| CDY65628 | Canola | cytosol, golgi, peroxisome | 18.53 | 26.97 |
| CDY39579 | Canola | cytosol, endoplasmic reticulum, peroxisome | 19.3 | 26.81 |
| CDY31156 | Canola | cytosol | 16.99 | 26.75 |
| CDX84140 | Canola | plastid | 18.73 | 26.72 |
| CDX75055 | Canola | plastid | 18.73 | 26.72 |
| CDY41508 | Canola | cytosol, endoplasmic reticulum, golgi, mitochondrion | 18.34 | 26.69 |
| CDX77121 | Canola | mitochondrion | 11.0 | 26.64 |
| CDY26931 | Canola | endoplasmic reticulum, extracellular | 17.37 | 26.47 |
| CDX88793 | Canola | extracellular, golgi | 17.37 | 26.32 |
| CDX92349 | Canola | endoplasmic reticulum, golgi | 17.18 | 26.18 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 17.57 | 26.0 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 17.57 | 26.0 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 17.95 | 25.62 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 17.76 | 25.56 |
| CDY67187 | Canola | extracellular, golgi | 16.02 | 24.92 |
| CDY43140 | Canola | extracellular | 16.02 | 24.92 |
| CDY43139 | Canola | extracellular, golgi | 16.02 | 24.92 |
| CDY30542 | Canola | mitochondrion | 18.15 | 24.42 |
| CDY21822 | Canola | cytosol, golgi, peroxisome | 17.95 | 24.41 |
| CDY67186 | Canola | extracellular | 14.86 | 24.37 |
| CDX77906 | Canola | cytosol, golgi, peroxisome | 17.57 | 24.33 |
| CDY21213 | Canola | extracellular | 15.06 | 23.42 |
| CDY49934 | Canola | endoplasmic reticulum, golgi | 15.83 | 23.3 |
| CDY49935 | Canola | extracellular | 14.86 | 23.12 |
| CDY21214 | Canola | endoplasmic reticulum, golgi, plastid | 15.64 | 23.01 |
| CDX95073 | Canola | golgi, vacuole | 17.57 | 21.88 |
| CDX78221 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 5.02 | 21.85 |
| CDY32828 | Canola | nucleus | 17.18 | 21.34 |
| CDY68922 | Canola | cytosol, mitochondrion | 8.3 | 20.67 |
| CDY68993 | Canola | plasma membrane | 7.34 | 20.32 |
| CDY68104 | Canola | cytosol | 6.37 | 20.25 |
| CDY35686 | Canola | endoplasmic reticulum, golgi | 18.15 | 16.58 |
| CDX77120 | Canola | extracellular | 4.63 | 6.69 |
Protein Annotations
| EnsemblPlants:CDY22195 | EnsemblPlantsGene:GSBRNA2T00018610001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:IPR029058 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF994 | PFAM:PF00561 | ProteinID:CDY22195 |
| ProteinID:CDY22195.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0004EE1991 | UniProt:A0A078G6V8 | MapMan:35.2 |
Description
BnaC01g39060DBnaC01g39060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6V8]
Coordinates
chrLK032128:+:491636..494151
Molecular Weight (calculated)
58425.5 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.357
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMRRGVPT WQEELASLMD GGLQYDDGSP IGQDSRSGFE SVVDGSGSGS ESTESLKEQV TGFMKSWGEM LMDLAVGCKD VVQQTLVSED SVVVRKLRKP
101: AAKLRFLNEY LPEDRDPAHA WPVIFFVFLI ALAALSFGSG NETSVPVLKK LRLHPPGASR VELPDGRYLA YQELGVSSDR ARYSLIVPHS FMSSRLAGIP
201: GVKDSLLKDY GVRLVSYDLP GFGESDPHRG RNLSSSASDM IDLASALGIV EKFWLLGYSS GSMHAWAAMR YFPDRIAGVA MIAPMINPYE ASMSKEETAK
301: TWEQWPRKRK FKYFLARRWP SLLPFFYRRS FLSGYLQPLD QWMSISLGEK DKHVMRDPVF EEHYQRNVEE STRQGTAKPF VEEAVLHVSN WGFNLPDFRL
401: QKKCKANGVL SWLMSMYSES ECELVGFGKP IHIWQGMEDR VAPPSVTDYI SRVIPEATVH RLPSEGHFSY FFFCDECHKE IFSALFGEPQ GPVELTEERT
501: ETHKPDQPET GSSNISTT
101: AAKLRFLNEY LPEDRDPAHA WPVIFFVFLI ALAALSFGSG NETSVPVLKK LRLHPPGASR VELPDGRYLA YQELGVSSDR ARYSLIVPHS FMSSRLAGIP
201: GVKDSLLKDY GVRLVSYDLP GFGESDPHRG RNLSSSASDM IDLASALGIV EKFWLLGYSS GSMHAWAAMR YFPDRIAGVA MIAPMINPYE ASMSKEETAK
301: TWEQWPRKRK FKYFLARRWP SLLPFFYRRS FLSGYLQPLD QWMSISLGEK DKHVMRDPVF EEHYQRNVEE STRQGTAKPF VEEAVLHVSN WGFNLPDFRL
401: QKKCKANGVL SWLMSMYSES ECELVGFGKP IHIWQGMEDR VAPPSVTDYI SRVIPEATVH RLPSEGHFSY FFFCDECHKE IFSALFGEPQ GPVELTEERT
501: ETHKPDQPET GSSNISTT
001: MEEMRRGVPT WQDELASLMD GGLQYDGSPI DLTADTESRS KSSGFESGSG SESVESLKDQ VTGFMKSWGE MLMDLAIGCK DVVQQMVVTD DSFVVRKLRK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.