CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

nucleus 2
mitochondrion 1
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93573	Canola	cytosol	67.79	88.68
Bra018636.1-P	Field mustard	cytosol	67.79	88.12
AT1G08310.2	Thale cress	cytosol	58.41	76.42
CDY31156	Canola	cytosol	57.45	72.64
CDY68993	Canola	plasma membrane	32.21	71.66
CDY32828	Canola	nucleus	59.13	58.99
CDY68922	Canola	cytosol, mitochondrion	29.33	58.65
CDY30542	Canola	mitochondrion	51.44	55.58
CDY60542	Canola	cytosol	42.55	53.96
CDY72669	Canola	cytosol	14.42	48.0
Solyc06g074330.2.1	Tomato	cytosol	39.66	47.97
Solyc01g009500.2.1	Tomato	cytosol	39.42	47.67
PGSC0003DMT400018400	Potato	extracellular	39.66	46.61
CDY70769	Canola	cytosol	13.94	46.4
PGSC0003DMT400030589	Potato	extracellular	39.42	46.33
Solyc01g009480.2.1	Tomato	cytosol	33.41	43.03
PGSC0003DMT400030553	Potato	cytosol	33.41	43.03
CDX77121	Canola	mitochondrion	20.67	40.19
GSMUA_Achr10P...	Banana	cytosol	7.93	38.82
CDY09141	Canola	endoplasmic reticulum, golgi	29.33	35.78
CDX88793	Canola	extracellular, golgi	28.61	34.8
CDY26931	Canola	endoplasmic reticulum, extracellular	28.37	34.71
CDY49719	Canola	extracellular	28.12	34.11
CDY67186	Canola	extracellular	25.72	33.86
CDX92349	Canola	endoplasmic reticulum, golgi	27.64	33.82
CDX84140	Canola	plastid	28.61	32.78
CDX75055	Canola	plastid	28.61	32.78
CDY43140	Canola	extracellular	26.2	32.73
CDX71001	Canola	extracellular	17.07	32.72
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	27.4	32.29
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	28.85	32.17
CDY43139	Canola	extracellular, golgi	25.72	32.13
CDY67187	Canola	extracellular, golgi	25.72	32.13
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	27.4	32.02
CDY65628	Canola	cytosol, golgi, peroxisome	27.4	32.02
CDY49935	Canola	extracellular	25.48	31.83
CDX77906	Canola	cytosol, golgi, peroxisome	28.61	31.82
CDY21822	Canola	cytosol, golgi, peroxisome	29.09	31.76
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	26.44	31.43
CDY21213	Canola	extracellular	25.0	31.23
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	26.2	31.14
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	26.68	30.83
CDX96530	Canola	endoplasmic reticulum, golgi	26.44	30.3
CDY49934	Canola	endoplasmic reticulum, golgi	25.24	29.83
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	25.24	29.83
CDY68104	Canola	cytosol	11.06	28.22
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	6.73	23.53
CDY35686	Canola	endoplasmic reticulum, golgi	30.29	22.22
CDX77120	Canola	extracellular	17.31	20.06
CDY71255	Canola	cytosol	13.7	18.15
CDY10412	Canola	cytosol	22.84	18.03
CDX70335	Canola	cytosol	22.6	17.84
CDY22195	Canola	cytosol, nucleus, plastid	21.88	17.57
CDY41305	Canola	cytosol, nucleus, plastid	21.88	17.5

Protein Annotations

EnsemblPlants:CDX95073	EnsemblPlantsGene:GSBRNA2T00100593001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR10992
PANTHER:PTHR10992:SF774	ProteinID:CDX95073	ProteinID:CDX95073.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53474
UniParc:UPI0004EF197E	MapMan:35.2	:	:	:	:

Description

BnaC05g05980D

Coordinates

chrLK031886:-:979886..982193

Molecular Weight (calculated)

47710.1 Da

IEP (calculated)

8.031

GRAVY (calculated)

-0.286

Length

416 amino acids

Sequence
(BLAST)

001: MKDGLAKGFR RGLFCLFFSL GLSTQIQGGW ILAKESEEEY LVWSSKILYS YSNSIHQGGA LLAFSTSSRL LYQSSSLSCA HKDKIDHFFD HSISSVFLPD
101: SRQIIFSSVT NKCLMGDTCE NSNRVKLSDG RLLAYRESGV PKEEAKYKII LVHGFGSSKD MNFSASKELI QELGVYLLFY DRSGYGDSDA NTKRSLKSEV
201: DDIAELADHL EIGPKLSGVA FVAPVVNYRW PSLPKKLIKK DYRRGIIRWC LRISRFAPGL LHWWVVQKVI PSNSSVLESN PVYFNSHDVE VLKRTTGFPM
301: LTKDKLRERN VFDTLRDDFV ACFGQWDFEP ADLNITEESS VHIWHGKEDK VVPFQLQRCI LQKQPLINYH EIPQGGHLIV HYDGTCDAIL RSLLLGEEHK
401: MYKPMIRYYS DYYHYH

Best Arabidopsis Sequence Match ( AT1G08310.1 )
(BLAST)

001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKELIEELE VYLLFYDRSG YGASDSNTKR SLESEVEDIA ELADQLELGP
101: KFYLIGISMG SYPTWGCLRH IPHRLSGVAF VAPVVNYRWP SLPKKLIKKD YRTGIIKWGL RISKYAPGLL HWWIIQKLFA STSSVLESNP VYFNSHDIEV
201: LKRKTGFPML TKEKLRERNV FDTLRDDFMV CFGQWDFEPA DLSISTKSYI HIWHGKEDKV VPFQLQRCIL QKQPLINYHE IPQGGHLIVH YDGICDTILR
301: ALLLKEEQQK LYKIN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.