Factsheet for Solyc01g009480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030553	Potato	cytosol	95.36	95.36
Solyc01g009500.2.1	Tomato	cytosol	56.66	53.2
Solyc06g074330.2.1	Tomato	cytosol	56.04	52.62
AT1G08310.2	Thale cress	cytosol	47.99	48.74
Bra018636.1-P	Field mustard	cytosol	47.68	48.12
CDX93573	Canola	cytosol	47.06	47.8
GSMUA_Achr10P...	Banana	cytosol	11.76	44.71
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	11.76	44.19
CDY31156	Canola	cytosol	43.96	43.16
Bra030720.1-P	Field mustard	nucleus	38.7	42.96
CDY30542	Canola	mitochondrion	47.99	40.26
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	42.41	38.81
Solyc11g067260.1.1	Tomato	plastid	44.89	37.56
Solyc07g024090.1.1	Tomato	cytosol	14.24	37.4
CDX77121	Canola	mitochondrion	24.46	36.92
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	38.7	35.92
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	39.32	35.57
CDY68993	Canola	plasma membrane	20.43	35.29
CDY32828	Canola	nucleus	45.51	35.25
Solyc05g055290.2.1	Tomato	extracellular, golgi	37.77	35.16
Solyc09g009500.2.1	Tomato	plastid	40.25	35.14
Solyc09g009530.2.1	Tomato	plastid	36.53	33.91
CDX95073	Canola	golgi, vacuole	43.03	33.41
Solyc09g009520.2.1	Tomato	plastid	38.08	32.71
Solyc11g007040.1.1	Tomato	plastid	40.56	32.35
Solyc09g009510.2.1	Tomato	plastid	37.77	32.11
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	40.25	30.88
Bra034356.1-P	Field mustard	mitochondrion	49.54	24.96
Solyc09g007380.2.1	Tomato	cytosol	26.32	16.16
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	24.77	14.79
CDX77120	Canola	extracellular	14.24	12.81

Protein Annotations

EnsemblPlants:Solyc01g009480.2.1	EnsemblPlantsGene:Solyc01g009480.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	PFAM:PF12697
SUPFAM:SSF53474	UniParc:UPI0002763726	UniProt:K4ATE4	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1:-:3702854..3706348

Molecular Weight (calculated)

37281.5 Da

IEP (calculated)

8.793

GRAVY (calculated)

-0.474

Length

323 amino acids

Sequence
(BLAST)

001: MVSAETKPNI SSNFKLIDGR NLCYKERGVP KEKSNYRIIF IHGFDSSKER DFLAPQELMN SMGVYIVQFD RAGYGGSDPN PKRSLRSEAS DIEELANHLE
101: LGSKFHIIGF SMGSYPTWSC IKHLSHRLAG VAFVVPIVNY QWPSLPESVL KDDERKKWYK RMTLVARYAP KLLHWWMIRK TSQSSSNGGA KPRYFTDKDL
201: ELLKNAPGFQ FLTADKLKSR SVFNNLRSDF LVAFSKWDFD PLELSNPFPE NDKRPVHLWH GCEDRFINLK LQRHVSERLP WIQYHEVHDG GHLLIYDTAV
301: CEAILKSLLL GEDTPLYTPQ LDS

Best Arabidopsis Sequence Match ( AT3G44510.2 )
(BLAST)

001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.