Factsheet for Solyc11g072440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	95.75	95.4
VIT_06s0004g03310.t01	Wine grape	cytosol	54.9	60.49
KRG89038	Soybean	cytosol, golgi, plastid	54.16	60.41
GSMUA_Achr6P33050_001	Banana	cytosol	52.87	56.86
KRH24928	Soybean	golgi, peroxisome, plasma membrane	53.05	55.84
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	52.5	55.69
EER95045	Sorghum	cytosol	53.79	54.7
Zm00001d028727_P001	Maize	plasma membrane	53.05	53.85
Zm00001d047749_P001	Maize	cytosol	51.94	53.42
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	52.68	53.17
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	52.13	52.71
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	51.76	52.63
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	51.94	52.62
Solyc09g007380.2.1	Tomato	cytosol	50.09	51.52
HORVU4Hr1G056700.4	Barley	plastid	52.5	44.44
Os12t0535400-01	Rice	cytosol, plasma membrane	12.94	43.48
Solyc07g024090.1.1	Tomato	cytosol	6.65	29.27
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	17.74	27.59
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	17.56	26.61
Solyc09g009530.2.1	Tomato	plastid	16.27	25.29
Solyc09g009500.2.1	Tomato	plastid	17.19	25.14
Solyc01g009480.2.1	Tomato	cytosol	14.79	24.77
Solyc05g055290.2.1	Tomato	extracellular, golgi	15.71	24.5
Solyc09g009510.2.1	Tomato	plastid	17.19	24.47
Solyc06g074330.2.1	Tomato	cytosol	15.53	24.42
Solyc11g067260.1.1	Tomato	plastid	17.19	24.09
Solyc01g009500.2.1	Tomato	cytosol	15.16	23.84
Solyc11g007040.1.1	Tomato	plastid	17.01	22.72
Solyc09g009520.2.1	Tomato	plastid	15.71	22.61
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	17.38	22.33
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	14.42	22.1
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	3.33	20.93

Protein Annotations

EnsemblPlants:Solyc11g072440.1.1	EnsemblPlantsGene:Solyc11g072440.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	PFAM:PF00561	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0002769CAF	UniProt:K4DAV1	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr11:-:55614355..55618102

Molecular Weight (calculated)

60771.5 Da

IEP (calculated)

6.413

GRAVY (calculated)

-0.272

Length

541 amino acids

Sequence
(BLAST)

001: MSEVNDSSAA WREGTGSVVG DTEVRYNSRY SAAGGGYGGG PAGVEVKGKD GENWKFHALE FAKGFAEMSV EFGKGVRDVL KQSVIREDSI LVRKVGPLCC
101: NVCRRLSFLN EYLPEDRDPA HAWSVIFFVL FLASAVLIAS NDNIYPTTSV KKVCVHPPSA SQISLPDGRH LAYQQQGVPA ELARFSMIAP HSFVSSRIAG
201: IPGIKDSLLQ EYGIRLVTYD LPGFGESDPH PSRNLESSAM DMLHLSYAVN VTDKFWVVGF SGGCMHAWAA LRYIPDRIAG AVMVAPMVSP YEPRMTKEEK
301: SKMWKKWTTK KKNMYILARK FPRLLPYFYR RSFLSGVHGQ IETRLALSLG IRDKALLEHP LFEKSWQRDV EESVRQKNAK PFVEEAVLQV SNWGFSPADL
401: KVQRTRTGKG IMHWIKSLFG QTDEILTGFL GQIHVWQGME DMVVPPSTSD FLQRVLPDAM VHRLLYEGHF TYFYFCDECH RHIFSTVFGN PQGPLTPEPE
501: PDQSPIQNDD VEMQDTILGD VATDEENVSI VVNPDKEDYI D

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.