Factsheet for Solyc09g009530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009510.2.1	Tomato	plastid	93.97	86.05
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	72.99	71.15
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	70.98	70.98
VIT_08s0007g03440.t01	Wine grape	plastid	65.8	60.74
Solyc09g009520.2.1	Tomato	plastid	63.51	58.78
AT1G74300.1	Thale cress	extracellular	58.05	58.38
Solyc09g009500.2.1	Tomato	plastid	61.78	58.11
KRH67906	Soybean	golgi, plastid	61.78	58.11
KRG96190	Soybean	extracellular, plasma membrane	47.13	56.94
KRH30836	Soybean	mitochondrion, plastid	60.92	56.38
CDX84140	Canola	plastid	58.33	55.92
CDX75055	Canola	plastid	58.33	55.92
Bra005286.1-P	Field mustard	plastid	58.33	55.92
AT2G36290.1	Thale cress	plastid	58.33	55.77
KRH32735	Soybean	endoplasmic reticulum	59.77	55.47
CDX96530	Canola	endoplasmic reticulum, golgi	57.47	55.1
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	56.9	55.0
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	56.9	54.55
GSMUA_Achr11P...	Banana	mitochondrion	58.05	54.45
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	52.59	53.2
HORVU6Hr1G033060.1	Barley	plastid	55.75	52.57
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	53.74	51.94
TraesCS2A01G294400.1	Wheat	plastid	53.16	51.39
TraesCS2D01G292100.1	Wheat	plastid	52.87	51.11
TraesCS6B01G191000.1	Wheat	plastid	54.02	50.95
AT1G74290.1	Thale cress	mitochondrion	54.31	50.94
Solyc05g055290.2.1	Tomato	extracellular, golgi	50.57	50.72
TraesCS6D01G152300.1	Wheat	plastid	54.02	50.67
EES05176	Sorghum	plastid	53.16	50.41
TraesCS6A01G160400.1	Wheat	plastid	53.74	50.4
AT1G74280.1	Thale cress	golgi, mitochondrion	53.45	50.0
Os02t0532300-02	Rice	plasma membrane	53.16	49.73
VIT_03s0017g02230.t01	Wine grape	cytosol	22.41	49.37
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	53.45	49.08
Zm00001d016696_P002	Maize	extracellular, plasma membrane	51.15	48.9
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	52.01	48.66
OQU81513	Sorghum	cytosol	28.45	48.29
Solyc11g007040.1.1	Tomato	plastid	55.46	47.65
TraesCS1D01G269000.1	Wheat	plastid	49.71	47.14
Os04t0412000-01	Rice	plasma membrane	52.01	46.17
HORVU1Hr1G074380.4	Barley	golgi	48.28	45.78
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	11.21	45.35
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	54.6	45.13
Solyc07g024090.1.1	Tomato	cytosol	15.8	44.72
EES04288	Sorghum	extracellular	45.4	43.89
Zm00001d003800_P011	Maize	extracellular	50.29	42.79
TraesCS1A01G268900.1	Wheat	plastid	49.14	42.33
Solyc11g067260.1.1	Tomato	plastid	45.11	40.67
Solyc01g009500.2.1	Tomato	cytosol	38.22	38.66
Solyc06g074330.2.1	Tomato	cytosol	37.07	37.5
Solyc01g009480.2.1	Tomato	cytosol	33.91	36.53
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	33.33	32.86
EER89183	Sorghum	cytosol	24.71	30.18
Solyc09g007380.2.1	Tomato	cytosol	26.72	17.68
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	25.29	16.27

Protein Annotations

EnsemblPlants:Solyc09g009530.2.1	EnsemblPlantsGene:Solyc09g009530.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	PFAM:PF12697
SignalP:SignalP-noTM	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000276C6D6	UniProt:K4CQY2	MapMan:35.2

Description

No Description!

Coordinates

chr9:-:2936861..2939724

Molecular Weight (calculated)

39878.4 Da

IEP (calculated)

6.375

GRAVY (calculated)

-0.104

Length

348 amino acids

Sequence
(BLAST)

001: MTIKMIAIFG IVILALIYKA IIPPSPKICG SPNGPLITAP RIKLSDGRYL AYKENGVPRD EAKHKFVFIH GFDCVRHDVA LLTTISPEVM QSLGIYIVSI
101: DRPGYGESDP HPQRTPKTLA LDIEELVDQL ELGPKFYVIG FSMGGQAVWG LLKYIPHRLA GAILLTPVTN YWWGSFPANL TKQAYYEQLV QDQWTLRIAH
201: YLPWLTYWWN TQRLFPSSSV ATFSEDILFE QDRVLMPIFD SYQSKYRDLV RQQGEYESIH RDIMIGFGTW EFDPMELENP FPNGEGSVHI WQGDEDGHVP
301: VILQRFIAKK LPWIHYHEMK GGGHMFPWAE GMGDKVMKTF LLGEPFVM

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.