CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, vacuole

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	75.46	83.14
TraesCS2D01G292100.1	Wheat	plastid	76.78	80.83
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	76.25	80.28
TraesCS2A01G294400.1	Wheat	plastid	76.25	80.28
Os04t0412000-01	Rice	plasma membrane	78.89	76.28
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	74.41	75.81
OQU81513	Sorghum	cytosol	37.99	70.24
EES05176	Sorghum	plastid	66.75	68.94
GSMUA_Achr11P...	Banana	mitochondrion	58.31	59.57
KRG96190	Soybean	extracellular, plasma membrane	41.42	54.51
KRH30836	Soybean	mitochondrion, plastid	53.83	54.26
KRH67906	Soybean	golgi, plastid	52.77	54.05
VIT_13s0106g00780.t01	Wine grape	mitochondrion	53.3	54.01
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	49.34	53.74
KRH32735	Soybean	endoplasmic reticulum	53.03	53.6
VIT_08s0007g03440.t01	Wine grape	plastid	53.3	53.58
Solyc09g009530.2.1	Tomato	plastid	49.08	53.45
AT1G74300.1	Thale cress	extracellular	48.55	53.18
AT2G36290.1	Thale cress	plastid	50.92	53.02
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	49.87	52.94
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	51.98	52.39
Solyc09g009520.2.1	Tomato	plastid	51.19	51.6
CDX96530	Canola	endoplasmic reticulum, golgi	49.34	51.52
CDX84140	Canola	plastid	49.34	51.52
KRH33274	Soybean	extracellular, golgi, vacuole	46.44	51.31
Bra005286.1-P	Field mustard	plastid	49.08	51.24
CDX75055	Canola	plastid	49.08	51.24
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	49.08	51.24
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	48.28	50.83
Solyc09g009500.2.1	Tomato	plastid	49.34	50.54
PGSC0003DMT400006848	Potato	plastid	48.81	50.0
AT1G74280.1	Thale cress	golgi, mitochondrion	48.81	49.73
Solyc07g024090.1.1	Tomato	cytosol	16.09	49.59
AT1G74290.1	Thale cress	mitochondrion	48.28	49.33
PGSC0003DMT400006849	Potato	mitochondrion, plastid	49.08	48.95
Solyc09g009510.2.1	Tomato	plastid	49.08	48.95
EES15681	Sorghum	golgi, plasma membrane, vacuole	44.59	48.7
EES04288	Sorghum	extracellular	46.17	48.61
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	44.85	47.89
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.54	47.14
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	43.54	47.14
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	43.27	46.86
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	41.69	46.33
AT3G54240.1	Thale cress	extracellular, golgi, vacuole	42.48	46.0
Solyc05g055290.2.1	Tomato	extracellular, golgi	41.69	45.53
Solyc11g007040.1.1	Tomato	plastid	46.97	43.95
PGSC0003DMT400061634	Potato	plastid	47.49	43.9
EER94632	Sorghum	cytosol	41.95	43.56
VIT_03s0017g02230.t01	Wine grape	cytosol	17.94	43.04
EES01786	Sorghum	endoplasmic reticulum, extracellular	40.9	42.47
EER95643	Sorghum	cytosol	40.37	41.8
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	45.65	41.09
EER94631	Sorghum	plastid	38.79	36.3
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.82	34.45
EER89183	Sorghum	cytosol	25.86	34.39
EER95045	Sorghum	cytosol	28.23	20.11

Protein Annotations

EnsemblPlants:EES10737	EnsemblPlantsGene:SORBI_3006G068800	EntrezGene:8072964	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF983
PFAM:PF00561	ProteinID:EES10737	ProteinID:EES10737.1	RefSeq:XP_002446409.1	SEG:seg	SUPFAM:SSF53474
unigene:Sbi.2068	UniParc:UPI0001A86EDA	UniProt:C5YFU7	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr6:+:43187004..43191138

Molecular Weight (calculated)

42043.5 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.143

Length

379 amino acids

Sequence
(BLAST)

001: MAVSGEKRPP PPAPASGGTA RKKLILALFI CFSALLYKQI LQPPLPKIAG SPGGPPVTAT RTRLSDGRYL AYLEHGVPKE KAKYKIIFVH GFDSCRYDAL
101: PISTELAQEL GVYLLSFDRP GYAESDPHPG RTEKSIALDI AELADNLQLG LKFYLVGFSM GGEIMWSCLK HIPHRLSGVA ILGPVGNYWW SGLPANVSRD
201: AWYQQLPQDQ WAVWVAHHLP WLTYWWNSQR LFPASSVIAY NPALLSQEDK LLMAKFGYRT YMPQIRQQGE HECLHRDMMV GFGKWSWSPL QLENPFAGAD
301: DDGQEGAGKV HLWHGAEDLV VPVSLSRYIS EKLPWVVYHE LPKSGHLFLI GDGMADTIVK SLLLGDDHPS SASALTASS

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.