CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048565_P001	Maize	cytosol	85.75	87.92
Os10t0521400-01	Rice	cytosol	79.73	82.2
HORVU1Hr1G048530.2	Barley	plastid	76.44	78.15
TraesCS1B01G197000.1	Wheat	plastid	75.62	77.31
TraesCS1A01G189300.1	Wheat	plastid	75.62	77.31
TraesCS1D01G187100.1	Wheat	plastid	74.79	76.47
EER95643	Sorghum	cytosol	72.6	72.4
GSMUA_Achr11P...	Banana	cytosol	32.88	59.41
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, plasma membrane	57.53	58.66
GSMUA_Achr11P...	Banana	cytosol	34.25	55.07
VIT_15s0048g02060.t01	Wine grape	plastid	45.75	54.58
VIT_15s0048g02050.t01	Wine grape	cytosol	49.04	54.57
EER94631	Sorghum	plastid	57.53	51.85
EES15681	Sorghum	golgi, plasma membrane, vacuole	45.21	47.55
EES01786	Sorghum	endoplasmic reticulum, extracellular	46.03	46.03
EES05176	Sorghum	plastid	44.66	44.41
EES04288	Sorghum	extracellular	41.64	42.22
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	43.56	41.95
OQU81513	Sorghum	cytosol	22.47	40.0
EER89183	Sorghum	cytosol	22.74	29.12
EER95045	Sorghum	cytosol	28.22	19.36

Protein Annotations

EnsemblPlants:EER94632	EnsemblPlantsGene:SORBI_3001G322200	EntrezGene:8063187	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF999
PFAM:PF00561	ProteinID:EER94632	ProteinID:EER94632.1	RefSeq:XP_002467634.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0001A83116	UniProt:C5WUM4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60953355..60956030

Molecular Weight (calculated)

39813.3 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.286

Length

365 amino acids

Sequence
(BLAST)

001: MERLLWASTQ ALGCGGGKRG KGDDDDGLLV DPMGTVGQLG EWLCRAALQP PPPPRVCGSP GGPPVTARRV RLRDGRHLAY EESGVPREAA RYRIVFSHGF
101: SGSRLDSLRA SQEVAEELGV YMVAFDRAGY GESDPNPARS VRSAALDMEE LADALGLGDK FYAVGVSLGC HAVWGALRHI PHRLAGAAML APVVNYWWPG
201: LPAEASAAAY ARQARGDQWA LRVSHHAPGL LHWWMRQGWL PTSTVVDNTT HLPNRRDAET RAALAADGTL RRKRDAATQQ GIHESYYRDM TVMFGRWEFD
301: PMALPEPTCP VHLWQGDEDG LVPVVLQRHV AGSLPWVNYH ELPGTGHFLS AVPGLGDTVL RTLFG

Best Arabidopsis Sequence Match ( AT1G74280.1 )
(BLAST)

001: MTRDSSRNSS LKPWPRKKFL FPSVVIVIVG IIVAFTYQSK LKPPPPKLCG SSGGPPITAP RIKLQDGRYL AYKEHGLPRE KANRKIVFIH GSDCCRHDAV
101: FATLLSPDLV EELGVYMVSF DRPGYCESDP HPSRTPRSLV SDIEELADQL SLGSKFYVLG YSMGGQAAWG CLKYIPHRLA GVTLVAPVVN YYWKNLPLNV
201: STEGFNFQQK RDQLAVRVAH YTPWLIYWWN TQKWFPGSSI ANRDHSLLAQ PDKDIISKLG SSRKPHWAEV RQQGIHESIN RDMIVGFGNW EFGPLDLENP
301: FLNKEGSVHL WQGDEDMLVP AKLQRYLAHQ LPWVHYHEVP RSGHFFHYTK GVVDDIVKSL LTSDVRASRV CI

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C913]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.