CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0116300-01	Rice	cytosol	86.34	88.52
TraesCS4D01G350700.3	Wheat	cytosol	85.52	86.23
HORVU4Hr1G086270.1	Barley	cytosol	85.25	86.19
TraesCS5A01G526300.3	Wheat	cytosol	85.25	85.95
TraesCS4B01G356900.2	Wheat	cytosol	84.43	84.89
EER94632	Sorghum	cytosol	72.4	72.6
GSMUA_Achr11P...	Banana	cytosol	36.07	65.35
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, plasma membrane	60.38	61.73
Zm00001d048503_P001	Maize	mitochondrion	94.26	61.61
GSMUA_Achr11P...	Banana	cytosol	37.7	60.79
VIT_15s0048g02050.t01	Wine grape	cytosol	51.09	57.01
VIT_15s0048g02060.t01	Wine grape	plastid	46.72	55.88
EER94631	Sorghum	plastid	58.74	53.09
EES15681	Sorghum	golgi, plasma membrane, vacuole	43.44	45.82
EES01786	Sorghum	endoplasmic reticulum, extracellular	45.36	45.48
EES05176	Sorghum	plastid	44.54	44.41
Os03t0116316-00	Rice	plastid	17.21	44.06
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	41.8	40.37
OQU81513	Sorghum	cytosol	22.13	39.51
EES04288	Sorghum	extracellular	38.52	39.17
EER89183	Sorghum	cytosol	20.22	25.96
EER95045	Sorghum	cytosol	26.5	18.23

Protein Annotations

EnsemblPlants:EER95643	EnsemblPlantsGene:SORBI_3001G532300	EntrezGene:8077998	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF999
PFAM:PF00561	ProteinID:EER95643	ProteinID:EER95643.1	RefSeq:XP_002468645.1	SEG:seg	SUPFAM:SSF53474
unigene:Sbi.1557	UniParc:UPI0001A8325B	UniProt:C5X112	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr1:-:79545043..79551325

Molecular Weight (calculated)

39980.6 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.251

Length

366 amino acids

Sequence
(BLAST)

001: MWVTSSMPQV WDEEAAAKGG GAAAVTPAPA AAMLGSLAGW LSRTVQPQPP PPRVCGTEGG PPVTAPRLRL RDGRHLAYCE SGVPRDQARF KVVFSHGFTG
101: SREDSVRASQ EVAEELGVYM VGFDRAGYGQ SDPNPNRSVK SAALDVEELA DALGLGPKFY VIGISLGCHA VWGALKYIPD RIAGAAMMAP VVNYWWPGFP
201: PELAAEVYAK QEVGDQWALR VSHHAPGILH WWMDQSWLPT STVVAGTTPL PNARDAEIRR NMQADGTFQQ KREQATQQGI HESYYRDMTV MFGKWEFDPM
301: ALPEPPCPVH LWQGDEDGLV PVVLQRYLAG KLAWVNYHEL PGTGHFLSAV PGLGDTVLRT LFGQKQ

Best Arabidopsis Sequence Match ( AT1G74300.1 )
(BLAST)

001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.