CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	64.71	22.0
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	63.87	21.71
Solyc07g024090.1.1	Tomato	cytosol	19.33	18.7
CDY70769	Canola	cytosol	19.33	18.4
CDY72669	Canola	cytosol	18.49	17.6
CDX71001	Canola	extracellular	30.25	16.59
CDX96530	Canola	endoplasmic reticulum, golgi	42.86	14.05
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	41.18	13.61
CDX77121	Canola	mitochondrion	24.37	13.55
KRH33274	Soybean	extracellular, golgi, vacuole	38.66	13.41
CDY49719	Canola	extracellular	36.97	12.83
EES04288	Sorghum	extracellular	37.82	12.5
TraesCS1D01G269000.1	Wheat	plastid	37.82	12.26
Zm00001d003800_P011	Maize	extracellular	42.02	12.22
HORVU6Hr1G033060.1	Barley	plastid	37.82	12.2
CDX75055	Canola	plastid	36.97	12.12
CDX84140	Canola	plastid	36.97	12.12
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	37.82	12.06
CDY26931	Canola	endoplasmic reticulum, extracellular	34.45	12.06
EES05176	Sorghum	plastid	36.97	11.99
GSMUA_Achr11P...	Banana	mitochondrion	36.97	11.86
CDY09141	Canola	endoplasmic reticulum, golgi	33.61	11.73
TraesCS6D01G152300.1	Wheat	plastid	36.13	11.59
CDX77906	Canola	cytosol, golgi, peroxisome	36.13	11.5
HORVU1Hr1G074380.4	Barley	golgi	35.29	11.44
TraesCS6B01G191000.1	Wheat	plastid	35.29	11.38
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	32.77	11.34
TraesCS6A01G160400.1	Wheat	plastid	35.29	11.32
CDX92349	Canola	endoplasmic reticulum, golgi	31.93	11.18
CDX88793	Canola	extracellular, golgi	31.93	11.11
Os02t0532300-02	Rice	plasma membrane	34.45	11.02
Zm00001d016696_P002	Maize	extracellular, plasma membrane	33.61	10.99
TraesCS1A01G268900.1	Wheat	plastid	36.97	10.89
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	34.45	10.82
CDY21822	Canola	cytosol, golgi, peroxisome	34.45	10.76
Os04t0412000-01	Rice	plasma membrane	35.29	10.71
CDY65628	Canola	cytosol, golgi, peroxisome	31.09	10.39
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	31.09	10.39
TraesCS2D01G292100.1	Wheat	plastid	31.09	10.28
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	31.09	10.28
TraesCS2A01G294400.1	Wheat	plastid	31.09	10.28
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	31.09	9.95
CDY67186	Canola	extracellular	22.69	8.54
CDY30542	Canola	mitochondrion	26.89	8.31
CDY43140	Canola	extracellular	22.69	8.11
CDY71255	Canola	cytosol	21.01	7.96
CDY43139	Canola	extracellular, golgi	21.85	7.81
CDY67187	Canola	extracellular, golgi	21.85	7.81
CDY21213	Canola	extracellular	21.01	7.51
CDY49935	Canola	extracellular	21.01	7.51
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	21.85	7.39
CDY60542	Canola	cytosol	20.17	7.32
CDY49934	Canola	endoplasmic reticulum, golgi	21.01	7.1
CDY35686	Canola	endoplasmic reticulum, golgi	33.61	7.05
CDY31156	Canola	cytosol	19.33	6.99
CDX95073	Canola	golgi, vacuole	23.53	6.73
CDX93573	Canola	cytosol	17.65	6.6
CDY32828	Canola	nucleus	19.33	5.52
CDX70335	Canola	cytosol	23.53	5.31
CDY22195	Canola	cytosol, nucleus, plastid	21.85	5.02
CDY41305	Canola	cytosol, nucleus, plastid	21.85	5.0
CDY10412	Canola	cytosol	21.85	4.93
CDY68993	Canola	plasma membrane	5.04	3.21
EER89183	Sorghum	cytosol	6.72	2.81
OQU81513	Sorghum	cytosol	2.52	1.46
CDY68922	Canola	cytosol, mitochondrion	1.68	0.96
CDY68104	Canola	cytosol	0.84	0.61
CDX77120	Canola	extracellular	1.68	0.56

Protein Annotations

EnsemblPlants:CDX78221	EnsemblPlantsGene:GSBRNA2T00129540001	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	ProteinID:CDX78221	ProteinID:CDX78221.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE8E05	MapMan:35.2	:	:

Description

BnaA09g34160D

Coordinates

chrLK031814:+:1824107..1824752

Molecular Weight (calculated)

13139.4 Da

IEP (calculated)

9.657

GRAVY (calculated)

0.355

Length

119 amino acids

Sequence
(BLAST)

001: MKKCEFLIRL VGAVVIVLIA LGAWAIVSFT VPPPSKRCGT PGGPPITAPR IRLSNGSYLA YQEHGDSRQN ATLKIIFQVQ CCCRHSVIAL FFFGQGFLEE
101: NIIYVISYDR PGPVAMKRL

Best Arabidopsis Sequence Match ( AT3G54240.1 )
(BLAST)

001: MKKWLITGAV VIVLIGLGAW AIVSITPPPP KRCGTPGGPP ITAPRIRLSD GRYLAYEEHG VSRQNATFKI VFIHAFSTFR RDAVIANRVR PGFLEKNGIY
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSL3]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.