Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09141 | Canola | endoplasmic reticulum, golgi | 56.61 | 94.13 |
| CDY26931 | Canola | endoplasmic reticulum, extracellular | 50.26 | 83.82 |
| CDX92349 | Canola | endoplasmic reticulum, golgi | 49.38 | 82.35 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 48.15 | 80.29 |
| CDX88793 | Canola | extracellular, golgi | 47.09 | 78.07 |
| CDY68104 | Canola | cytosol | 21.69 | 75.46 |
| CDX71001 | Canola | extracellular | 25.57 | 66.82 |
| CDX77120 | Canola | extracellular | 40.56 | 64.07 |
| CDY70769 | Canola | cytosol | 12.87 | 58.4 |
| CDY72669 | Canola | cytosol | 12.87 | 58.4 |
| KRH26627 | Soybean | endoplasmic reticulum, extracellular, golgi | 33.86 | 57.14 |
| VIT_06s0080g00310.t01 | Wine grape | extracellular | 34.92 | 56.41 |
| PGSC0003DMT400019164 | Potato | extracellular, golgi | 32.28 | 53.82 |
| CDY43139 | Canola | extracellular, golgi | 30.51 | 51.95 |
| CDY67187 | Canola | extracellular, golgi | 30.51 | 51.95 |
| EES15681 | Sorghum | golgi, plasma membrane, vacuole | 31.39 | 51.3 |
| CDY43140 | Canola | extracellular | 29.98 | 51.05 |
| CDY67186 | Canola | extracellular | 27.87 | 50.0 |
| TraesCS5A01G128500.2 | Wheat | golgi | 30.34 | 49.57 |
| TraesCS5D01G136100.2 | Wheat | golgi | 30.34 | 49.57 |
| CDY21213 | Canola | extracellular | 28.92 | 49.25 |
| Os12t0152100-01 | Rice | plasma membrane | 29.63 | 48.98 |
| CDY49935 | Canola | extracellular | 28.75 | 48.95 |
| CDY49719 | Canola | extracellular | 28.75 | 47.52 |
| Solyc11g067260.1.1 | Tomato | plastid | 31.92 | 46.89 |
| Os01t0859200-01 | Rice | plasma membrane | 28.4 | 46.4 |
| CDY49934 | Canola | endoplasmic reticulum, golgi | 28.57 | 46.02 |
| CDY21214 | Canola | endoplasmic reticulum, golgi, plastid | 28.4 | 45.74 |
| CDX75055 | Canola | plastid | 29.1 | 45.45 |
| Zm00001d044704_P018 | Maize | plasma membrane | 31.39 | 45.18 |
| Zm00001d042780_P001 | Maize | endoplasmic reticulum, vacuole | 28.4 | 44.72 |
| CDX84140 | Canola | plastid | 28.57 | 44.63 |
| EES01786 | Sorghum | endoplasmic reticulum, extracellular | 28.4 | 44.11 |
| CDY39579 | Canola | cytosol, endoplasmic reticulum, peroxisome | 28.92 | 43.97 |
| HORVU5Hr1G042290.8 | Barley | golgi | 30.34 | 43.88 |
| CDY60542 | Canola | cytosol | 25.22 | 43.6 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 27.69 | 43.25 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 27.34 | 43.06 |
| Os12t0152500-00 | Rice | cytosol | 11.99 | 42.77 |
| CDY41508 | Canola | cytosol, endoplasmic reticulum, golgi, mitochondrion | 26.81 | 42.7 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 26.28 | 42.57 |
| CDY21822 | Canola | cytosol, golgi, peroxisome | 28.57 | 42.52 |
| CDY65628 | Canola | cytosol, golgi, peroxisome | 26.63 | 42.42 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 26.1 | 42.29 |
| CDX77906 | Canola | cytosol, golgi, peroxisome | 27.87 | 42.25 |
| CDX93573 | Canola | cytosol | 22.93 | 40.88 |
| CDY31156 | Canola | cytosol | 23.46 | 40.43 |
| CDX77121 | Canola | mitochondrion | 14.81 | 39.25 |
| CDY30542 | Canola | mitochondrion | 26.45 | 38.96 |
| CDY68922 | Canola | cytosol, mitochondrion | 12.7 | 34.62 |
| CDY32828 | Canola | nucleus | 25.04 | 34.05 |
| CDX78221 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.05 | 33.61 |
| CDX95073 | Canola | golgi, vacuole | 22.22 | 30.29 |
| CDY68993 | Canola | plasma membrane | 8.29 | 25.13 |
| CDY10412 | Canola | cytosol | 17.64 | 18.98 |
| CDY71255 | Canola | cytosol | 10.41 | 18.79 |
| CDX70335 | Canola | cytosol | 17.28 | 18.6 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 16.58 | 18.15 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 16.4 | 17.88 |
Protein Annotations
| MapMan:17.1.2.1.10 | Gene3D:3.30.190.20 | Gene3D:3.40.50.1820 | Gene3D:3.40.50.790 | GO:A0A078HD99 | UniProt:A0A078HD99 |
| InterPro:AB_hydrolase | EnsemblPlants:CDY35686 | ProteinID:CDY35686 | ProteinID:CDY35686.1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00059091001 | InterPro:Hydrolase_4 | InterPro:IPR016095 | InterPro:IPR029058 | PFAM:PF00687 |
| PFAM:PF12146 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF886 | InterPro:Ribosomal_L1-like | InterPro:Ribosomal_L1/biogenesis | InterPro:Ribosomal_L1_3-a/b-sand |
| SUPFAM:SSF53474 | SUPFAM:SSF56808 | TMHMM:TMhelix | UniParc:UPI0004EDDF4D | SEG:seg | : |
Description
BnaC02g09520DBnaC02g09520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD99]
Coordinates
chrLK032358:-:107886..113337
Molecular Weight (calculated)
64957.6 Da
IEP (calculated)
9.660
GRAVY (calculated)
-0.223
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLCSSLLFF QVYITVMMIL VIVAFLVCLV SYVYRSLKPP PPRICGVPHG PPVTSPRIRL SDGRYLAYRE SGVDRASANY KIIVVHGFNS SKDMEFPISK
101: DLIEEQGIYF LFFDRAGYGE SDPHPSRTVK SEAYDIQELA DKLKIGPKFY VIGISLGAYS VYSCLTYIPH RLAGAVLVVP FVSYWWTKVP QDILSKAFKL
201: MPEKDQWTYR VARYFPWLLY WWLTQKLFPS LSIISERSAL CSDRDLVILK KKLEYQSPRM EKARQQGDHE CLHRDMIAGF ATWEFDPTEL ENPFAEGVGS
301: VHMWQGAEDR IVPREVNEYI SKKLPWIKYH ELSGYGHLLH AEEQKCGTVS EKLPKMSKLQ SEAVREAISS MITHCKETKP RKFTETIELQ IGLKNYDPQK
401: DKRFSGSVKL PHIPRPKMKI CMLGDAQHVE EAEKIGLDSM DVEALKKLNK NKKLVKKLAK KFHAFLASES VIKQIPRLLG PGKFPTLVSH QESLEAKVNE
501: TKATVKFQLK KVLCMGVAVG NLGMEEKQIF QNVQMSVNFL VSLLKKNWQN VRCLYLKSTM GPPNRVF
101: DLIEEQGIYF LFFDRAGYGE SDPHPSRTVK SEAYDIQELA DKLKIGPKFY VIGISLGAYS VYSCLTYIPH RLAGAVLVVP FVSYWWTKVP QDILSKAFKL
201: MPEKDQWTYR VARYFPWLLY WWLTQKLFPS LSIISERSAL CSDRDLVILK KKLEYQSPRM EKARQQGDHE CLHRDMIAGF ATWEFDPTEL ENPFAEGVGS
301: VHMWQGAEDR IVPREVNEYI SKKLPWIKYH ELSGYGHLLH AEEQKCGTVS EKLPKMSKLQ SEAVREAISS MITHCKETKP RKFTETIELQ IGLKNYDPQK
401: DKRFSGSVKL PHIPRPKMKI CMLGDAQHVE EAEKIGLDSM DVEALKKLNK NKKLVKKLAK KFHAFLASES VIKQIPRLLG PGKFPTLVSH QESLEAKVNE
501: TKATVKFQLK KVLCMGVAVG NLGMEEKQIF QNVQMSVNFL VSLLKKNWQN VRCLYLKSTM GPPNRVF
001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.