CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77121	Canola	mitochondrion	50.91	91.59
CDX93573	Canola	cytosol	57.66	69.81
CDY72669	Canola	cytosol	21.82	67.2
CDY70769	Canola	cytosol	21.3	65.6
CDY31156	Canola	cytosol	55.58	65.05
CDY60542	Canola	cytosol	50.65	59.45
CDY68922	Canola	cytosol, mitochondrion	29.87	55.29
CDY32828	Canola	nucleus	55.84	51.56
CDX95073	Canola	golgi, vacuole	55.58	51.44
Solyc06g074330.2.1	Tomato	cytosol	43.9	49.13
PGSC0003DMT400018400	Potato	extracellular	44.94	48.87
PGSC0003DMT400030553	Potato	cytosol	40.52	48.3
CDY68993	Canola	plasma membrane	23.38	48.13
Solyc01g009480.2.1	Tomato	cytosol	40.26	47.99
Solyc01g009500.2.1	Tomato	cytosol	42.86	47.97
PGSC0003DMT400030589	Potato	extracellular	43.38	47.18
CDX88793	Canola	extracellular, golgi	38.18	42.98
CDX71001	Canola	extracellular	24.16	42.86
CDY26931	Canola	endoplasmic reticulum, extracellular	37.66	42.65
CDY09141	Canola	endoplasmic reticulum, golgi	37.66	42.52
CDX92349	Canola	endoplasmic reticulum, golgi	36.36	41.18
CDY43140	Canola	extracellular	35.06	40.54
CDX75055	Canola	plastid	38.18	40.5
CDY49719	Canola	extracellular	35.84	40.23
CDX84140	Canola	plastid	37.66	39.94
CDY67187	Canola	extracellular, golgi	34.55	39.94
CDY43139	Canola	extracellular, golgi	34.29	39.64
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	36.62	39.17
CDY67186	Canola	extracellular	31.69	38.61
CDX96530	Canola	endoplasmic reticulum, golgi	35.84	38.02
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	35.06	37.92
CDY65628	Canola	cytosol, golgi, peroxisome	34.81	37.64
CDY21213	Canola	extracellular	32.47	37.54
CDY49935	Canola	extracellular	32.47	37.54
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	33.77	37.14
CDX77906	Canola	cytosol, golgi, peroxisome	35.84	36.9
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	33.51	36.86
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	35.58	36.73
CDY21822	Canola	cytosol, golgi, peroxisome	36.1	36.48
CDY49934	Canola	endoplasmic reticulum, golgi	32.47	35.51
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	32.47	35.51
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	32.47	35.41
GSMUA_Achr10P...	Banana	cytosol	7.53	34.12
CDY68104	Canola	cytosol	14.03	33.13
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	8.31	26.89
CDY35686	Canola	endoplasmic reticulum, golgi	38.96	26.45
CDX77120	Canola	extracellular	23.12	24.79
CDY71255	Canola	cytosol	17.14	21.02
CDY10412	Canola	cytosol	26.49	19.35
CDX70335	Canola	cytosol	26.23	19.17
CDY22195	Canola	cytosol, nucleus, plastid	24.42	18.15
CDY41305	Canola	cytosol, nucleus, plastid	24.42	18.08

Protein Annotations

EnsemblPlants:CDY30542	EnsemblPlantsGene:GSBRNA2T00045271001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	PFAM:PF12697	ProteinID:CDY30542	ProteinID:CDY30542.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EF1A8B	UniProt:A0A078GZD6	MapMan:35.2	:	:

Description

BnaA04g15910DBnaA04g15910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZD6]

Coordinates

chrLK032254:+:343885..345620

Molecular Weight (calculated)

44052.0 Da

IEP (calculated)

9.444

GRAVY (calculated)

-0.421

Length

385 amino acids

Sequence
(BLAST)

001: MRRIGFHNLN QQRTRKVLTS SSSSSSTVLP HLAPSCQETI LSPQDPKPKT DLPSSFSFLR ETKPCISCPR NQVTDSVNRV KLRDGRFLAY KERGVPKNEA
101: KYKIILIHGF GSSKEMNFSA SKELIEELGV YFLLYDRAGY GDSDPNPERS LQSEALDIEE LAHKLQIGPK FYLIGVSMGS YPTWSCLKHI PHRLAGVAFV
201: APVVNYGWPS LSKKLIKKDY RRGLIKWCFR ISKYAPGLLH WWISQKLFPS TTSVLESNQL YFNTSDIEVL KKTTGFPMLT KDELRERSVF DTLKDDFLAG
301: FGQWDFDPSD VRMSGENSVH IWHGKEDKVV PFQLHRCILK KLPWIKYHEI PHGGHLIVHY DGTCDAVLRA LLVGENQKLY QPEHN

Best Arabidopsis Sequence Match ( AT1G08310.1 )
(BLAST)

001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKELIEELE VYLLFYDRSG YGASDSNTKR SLESEVEDIA ELADQLELGP
101: KFYLIGISMG SYPTWGCLRH IPHRLSGVAF VAPVVNYRWP SLPKKLIKKD YRTGIIKWGL RISKYAPGLL HWWIIQKLFA STSSVLESNP VYFNSHDIEV
201: LKRKTGFPML TKEKLRERNV FDTLRDDFMV CFGQWDFEPA DLSISTKSYI HIWHGKEDKV VPFQLQRCIL QKQPLINYHE IPQGGHLIVH YDGICDTILR
301: ALLLKEEQQK LYKIN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.