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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 2
  • plasma membrane 1
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion, vacuole
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96530 Canola endoplasmic reticulum, golgi 94.72 93.94
AT1G74300.1 Thale cress extracellular 73.06 76.01
AT1G74280.1 Thale cress golgi, mitochondrion 72.22 69.89
AT1G74290.1 Thale cress mitochondrion 71.39 69.27
CDX75055 Canola plastid 65.83 65.29
CDX84140 Canola plastid 65.28 64.74
Solyc09g009550.2.1 Tomato endoplasmic reticulum 58.61 60.63
Solyc09g009540.2.1 Tomato endoplasmic reticulum 57.22 57.7
VIT_08s0007g03440.t01 Wine grape plastid 59.72 57.03
KRH30836 Soybean mitochondrion, plastid 59.44 56.91
Solyc09g009530.2.1 Tomato plastid 55.0 56.9
CDY49719 Canola extracellular 53.89 56.56
CDY41508 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 55.56 56.18
CDY65628 Canola cytosol, golgi, peroxisome 55.28 55.9
KRH32735 Soybean endoplasmic reticulum 57.22 54.93
KRH67906 Soybean golgi, plastid 56.11 54.59
Solyc09g009500.2.1 Tomato plastid 55.0 53.51
KRG96190 Soybean extracellular, plasma membrane 42.78 53.47
PGSC0003DMT400006848 Potato plastid 54.72 53.24
PGSC0003DMT400006847 Potato golgi, mitochondrion, peroxisome, plastid 55.0 52.66
Solyc09g009510.2.1 Tomato plastid 55.56 52.63
PGSC0003DMT400006849 Potato mitochondrion, plastid 55.0 52.11
CDY39579 Canola cytosol, endoplasmic reticulum, peroxisome 53.89 52.01
CDX77906 Canola cytosol, golgi, peroxisome 53.89 51.87
GSMUA_Achr11P... Banana mitochondrion 53.33 51.75
Os04t0411800-01 Rice endoplasmic reticulum, golgi 49.44 51.74
CDY21822 Canola cytosol, golgi, peroxisome 54.72 51.71
Solyc09g009520.2.1 Tomato plastid 53.61 51.33
HORVU6Hr1G033060.1 Barley plastid 51.39 50.14
EES05176 Sorghum plastid 50.83 49.86
TraesCS2D01G292100.1 Wheat plastid 49.72 49.72
TraesCS2B01G310800.1 Wheat endoplasmic reticulum, golgi, plastid 49.72 49.72
TraesCS2A01G294400.1 Wheat plastid 49.72 49.72
CDY65400 Canola endoplasmic reticulum, golgi, vacuole 48.06 49.43
Os02t0532300-02 Rice plasma membrane 50.83 49.19
CDX76158 Canola endoplasmic reticulum, golgi, vacuole 47.78 49.14
TraesCS6B01G191000.1 Wheat plastid 50.28 49.05
HORVU2Hr1G072830.4 Barley endoplasmic reticulum, golgi 50.28 48.66
CDY26931 Canola endoplasmic reticulum, extracellular 45.83 48.53
TraesCS6D01G152300.1 Wheat plastid 50.0 48.52
Zm00001d016696_P002 Maize extracellular, plasma membrane 48.89 48.35
EES04288 Sorghum extracellular 48.33 48.33
EES10737 Sorghum endoplasmic reticulum, golgi, plastid, vacuole 50.83 48.28
TraesCS6A01G160400.1 Wheat plastid 49.72 48.25
CDY72669 Canola cytosol 16.67 48.0
TraesCS1D01G269000.1 Wheat plastid 48.61 47.68
CDX92349 Canola endoplasmic reticulum, golgi 45.0 47.65
CDX88793 Canola extracellular, golgi 45.0 47.37
CDY70769 Canola cytosol 16.39 47.2
OQU81513 Sorghum cytosol 26.39 46.34
HORVU1Hr1G074380.4 Barley golgi 46.94 46.05
CDY09141 Canola endoplasmic reticulum, golgi 43.06 45.45
Os04t0412000-01 Rice plasma membrane 49.17 45.15
VIT_03s0017g02230.t01 Wine grape cytosol 19.44 44.3
Zm00001d003800_P011 Maize extracellular 50.0 44.01
TraesCS1A01G268900.1 Wheat plastid 48.33 43.07
CDX71001 Canola extracellular 25.56 42.4
CDY68104 Canola cytosol 19.17 42.33
CDY49935 Canola extracellular 38.89 42.04
CDY21213 Canola extracellular 38.61 41.74
CDY43140 Canola extracellular 38.33 41.44
CDX78221 Canola endoplasmic reticulum, extracellular, plasma membrane 13.61 41.18
CDY67187 Canola extracellular, golgi 37.78 40.84
CDY43139 Canola extracellular, golgi 37.5 40.54
CDY67186 Canola extracellular 35.56 40.51
CDY49934 Canola endoplasmic reticulum, golgi 39.44 40.34
CDY21214 Canola endoplasmic reticulum, golgi, plastid 39.44 40.34
CDY60542 Canola cytosol 35.56 39.02
CDY31156 Canola cytosol 34.72 37.99
CDX93573 Canola cytosol 32.78 37.11
CDX77121 Canola mitochondrion 21.94 36.92
CDY30542 Canola mitochondrion 39.17 36.62
CDY68922 Canola cytosol, mitochondrion 19.44 33.65
EER89183 Sorghum cytosol 25.56 32.28
CDY32828 Canola nucleus 33.61 29.02
CDY35686 Canola endoplasmic reticulum, golgi 43.06 27.34
CDX95073 Canola golgi, vacuole 30.83 26.68
CDY68993 Canola plasma membrane 11.94 22.99
CDY71255 Canola cytosol 17.78 20.38
CDY10412 Canola cytosol 27.22 18.6
CDX70335 Canola cytosol 26.67 18.22
CDY41305 Canola cytosol, nucleus, plastid 25.83 17.88
CDY22195 Canola cytosol, nucleus, plastid 25.56 17.76
CDX77120 Canola extracellular 8.89 8.91
Protein Annotations
EnsemblPlants:CDX73073EnsemblPlantsGene:GSBRNA2T00103525001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:IPR029058
PANTHER:PTHR10992PANTHER:PTHR10992:SF997PFAM:PF00561ProteinID:CDX73073ProteinID:CDX73073.1SEG:seg
SUPFAM:SSF53474TMHMM:TMhelixUniParc:UPI0004EE1FFCMapMan:35.2::
Description
BnaC06g35210D
Coordinates
chrLK031797:+:1950116..1951398
Molecular Weight (calculated)
40430.2 Da
IEP (calculated)
7.006
GRAVY (calculated)
-0.344
Length
360 amino acids
Sequence
(BLAST)
001: MSTRSPTNPP RNSLLLPSVL VILVGVIAAL TYRSIIKPPP PKLCGSPGGP PITAPRIKLR DGGHLAYKDH GVPREEARRK VIFIHGSDGC RHDAVYATRL
101: SPGLIEELGM YLVSFDRPGY GESDPDPNRT PKSLALDVEE LADQLNLGEK FYLIGYSMGG QATWGCLKYI PHRLAGATLV APVVNYWWKS LPLNVSTQGY
201: SLQLKRDQWA VRVAHYAPWL IHWWNTQRWF PGSSVANRDG SSFSQPDKDI VLTSRKPHLA EVRPQGLPES INRDMIVGFG SWEFDPIELE NPFLNNDQGS
301: VHLWHGDDDM LVPVIPQRYI AEKLPWLQYH EVPGSGHFFH YNEGVVDDIV KTLFKTDTEN
Best Arabidopsis Sequence Match ( AT1G74300.1 )
(BLAST)
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.