Factsheet for Solyc09g009500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006848	Potato	plastid	95.41	95.41
Solyc09g009520.2.1	Tomato	plastid	73.78	72.61
VIT_08s0007g03440.t01	Wine grape	plastid	72.43	71.09
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	65.41	67.79
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	62.97	66.95
KRH30836	Soybean	mitochondrion, plastid	67.3	66.22
KRH32735	Soybean	endoplasmic reticulum	66.49	65.6
Solyc09g009510.2.1	Tomato	plastid	64.32	62.63
KRH67906	Soybean	golgi, plastid	62.16	62.16
Solyc09g009530.2.1	Tomato	plastid	58.11	61.78
AT2G36290.1	Thale cress	plastid	59.19	60.16
GSMUA_Achr11P...	Banana	mitochondrion	60.27	60.11
CDX75055	Canola	plastid	58.38	59.5
Bra005286.1-P	Field mustard	plastid	58.38	59.5
AT1G74300.1	Thale cress	extracellular	55.14	58.96
CDX84140	Canola	plastid	57.3	58.4
VIT_03s0017g02230.t01	Wine grape	cytosol	24.32	56.96
KRG96190	Soybean	extracellular, plasma membrane	44.05	56.6
HORVU6Hr1G033060.1	Barley	plastid	55.41	55.56
AT1G74290.1	Thale cress	mitochondrion	55.68	55.53
CDX96530	Canola	endoplasmic reticulum, golgi	54.32	55.37
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	54.05	55.1
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	53.51	55.0
AT1G74280.1	Thale cress	golgi, mitochondrion	55.14	54.84
Zm00001d016696_P002	Maize	extracellular, plasma membrane	52.43	53.3
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	49.46	53.2
TraesCS6B01G191000.1	Wheat	plastid	52.97	53.12
EES05176	Sorghum	plastid	52.43	52.86
Solyc11g007040.1.1	Tomato	plastid	57.84	52.84
Os02t0532300-02	Rice	plasma membrane	52.7	52.42
TraesCS6D01G152300.1	Wheat	plastid	52.16	52.02
TraesCS6A01G160400.1	Wheat	plastid	52.16	52.02
Solyc05g055290.2.1	Tomato	extracellular, golgi	48.65	51.87
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	50.0	51.39
TraesCS2A01G294400.1	Wheat	plastid	50.0	51.39
Solyc11g067260.1.1	Tomato	plastid	53.24	51.04
TraesCS1D01G269000.1	Wheat	plastid	50.27	50.68
TraesCS2D01G292100.1	Wheat	plastid	49.19	50.56
EES04288	Sorghum	extracellular	48.92	50.28
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	57.03	50.12
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	50.54	49.34
OQU81513	Sorghum	cytosol	27.3	49.27
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	11.35	48.84
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	48.92	48.66
HORVU1Hr1G074380.4	Barley	golgi	48.11	48.5
Os04t0412000-01	Rice	plasma membrane	50.81	47.96
TraesCS1A01G268900.1	Wheat	plastid	50.54	46.29
Zm00001d003800_P011	Maize	extracellular	50.0	45.23
Solyc07g024090.1.1	Tomato	cytosol	14.32	43.09
Solyc01g009480.2.1	Tomato	cytosol	35.14	40.25
Solyc01g009500.2.1	Tomato	cytosol	37.03	39.83
Solyc06g074330.2.1	Tomato	cytosol	36.49	39.24
EER89183	Sorghum	cytosol	26.49	34.39
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	32.43	33.99
Solyc09g007380.2.1	Tomato	cytosol	27.84	19.58
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	25.14	17.19

Protein Annotations

EnsemblPlants:Solyc09g009500.2.1	EnsemblPlantsGene:Solyc09g009500.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	PFAM:PF00561	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000276C6D3
UniProt:K4CQX9	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr9:-:2918891..2924458

Molecular Weight (calculated)

41636.9 Da

IEP (calculated)

9.288

GRAVY (calculated)

-0.300

Length

370 amino acids

Sequence
(BLAST)

001: MATKKISAAS ARAHTRKAKQ KSSIPFPSGA FAKILLVVLI GLLAWGYQAT RPPPPKTCGS PDGPPVTAPR IKLSDGRHLA YKETGVLRDN AKYKIVYIHG
101: YDGCRHDVPI NILSQDVIES LGVYIVSFDR PGYGESDPNP KRTVKSLAFD IQELADQLGL GSKFYVMGFS MGGQAVWTCL RYIPHRLAGA ALIAPVVNYW
201: WPRFPANMSQ EAFNLRLPQD KWTLRVAHYL PWLTYWWNTQ KFFPSCSAAG RNPAIFSSKD LELVSKQSSS QDYRAQVRQQ GEYESLHRDL MIGFGTWEFD
301: PMDLENPFPN NEGSVHLWQG DEDRLSPVTL QRYISQQLPW IQYHEIPGAG HLIPMIDGIG EKIFKTLLTA

Best Arabidopsis Sequence Match ( AT3G48410.1 )
(BLAST)

001: MAGEEIEREK KSAASARTHT RNNTQQSSSS GYLKTLLLVT FVGVLAWVYQ TIQPPPAKIV GSPGGPTVTS PRIKLRDGRH LAYTEFGIPR DEAKFKIINI
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.