Factsheet for TraesCS6B01G191000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G152300.1	Wheat	plastid	96.75	96.23
TraesCS6A01G160400.1	Wheat	plastid	96.48	95.96
HORVU6Hr1G033060.1	Barley	plastid	92.41	92.41
Os02t0532300-02	Rice	plasma membrane	76.69	76.08
EES05176	Sorghum	plastid	75.07	75.48
Zm00001d016696_P002	Maize	extracellular, plasma membrane	73.17	74.18
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	68.29	70.0
GSMUA_Achr11P...	Banana	mitochondrion	62.6	62.26
VIT_08s0007g03440.t01	Wine grape	plastid	57.72	56.5
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	54.2	56.02
VIT_13s0106g00780.t01	Wine grape	mitochondrion	56.64	55.88
KRH30836	Soybean	mitochondrion, plastid	56.37	55.32
AT1G74300.1	Thale cress	extracellular	51.49	54.91
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	51.76	54.89
Solyc09g009530.2.1	Tomato	plastid	50.95	54.02
KRH67906	Soybean	golgi, plastid	53.93	53.78
KRH32735	Soybean	endoplasmic reticulum	54.2	53.33
AT2G36290.1	Thale cress	plastid	52.57	53.3
PGSC0003DMT400006849	Potato	mitochondrion, plastid	54.74	53.16
Solyc09g009500.2.1	Tomato	plastid	53.12	52.97
Solyc09g009510.2.1	Tomato	plastid	54.47	52.89
KRH33274	Soybean	extracellular, golgi, vacuole	49.05	52.77
PGSC0003DMT400006848	Potato	plastid	52.85	52.7
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	53.66	52.66
Solyc09g009520.2.1	Tomato	plastid	53.12	52.13
KRG96190	Soybean	extracellular, plasma membrane	40.65	52.08
CDX75055	Canola	plastid	50.95	51.79
Bra005286.1-P	Field mustard	plastid	50.95	51.79
CDX84140	Canola	plastid	50.95	51.79
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	49.05	51.71
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	49.05	51.71
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	48.78	51.43
CDX96530	Canola	endoplasmic reticulum, golgi	50.41	51.24
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	50.41	51.24
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	48.51	50.42
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	49.05	50.28
AT3G54240.1	Thale cress	extracellular, golgi, vacuole	47.15	49.71
AT1G74290.1	Thale cress	mitochondrion	49.86	49.6
Solyc07g024090.1.1	Tomato	cytosol	16.53	49.59
Solyc05g055290.2.1	Tomato	extracellular, golgi	45.26	48.13
AT1G74280.1	Thale cress	golgi, mitochondrion	48.51	48.12
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	43.9	47.51
PGSC0003DMT400061634	Potato	plastid	52.3	47.07
Solyc11g007040.1.1	Tomato	plastid	51.22	46.67
VIT_03s0017g02230.t01	Wine grape	cytosol	19.24	44.94
TraesCS1B01G197000.1	Wheat	plastid	42.82	44.26
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	49.32	43.23
TraesCS4B01G356900.2	Wheat	cytosol	42.55	43.13
TraesCS1B01G196900.1	Wheat	endoplasmic reticulum, plasma membrane	40.65	40.76
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.38	35.29
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	27.64	19.17

Protein Annotations

EnsemblPlants:TraesCS6B01G191000.1	EnsemblPlantsGene:TraesCS6B01G191000	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF983	PFAM:PF12697	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr6B:+:224861075..224867016

Molecular Weight (calculated)

40965.9 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.217

Length

369 amino acids

Sequence
(BLAST)

001: MAGPGEKPSS TSANGTKAPL PPAAPGGSGI AKRLPRLAFV FLLALLYRQL QAPPPKICGS PDGPPVTGTR IRLSDGRHLA YHESGVPKEH ANHKIIFVHG
101: FDSCRYDALR VSPELAQELG IYILSFDRPG YGESDPHPAR TEKSIALDIA ELADSLHLGS RFYLVGFSMG GEIMWSCLKH IPHRLAGVSI LGPVGNYWWS
201: GFPSNVSWDA WYQQIPQDQW AVRVAHHAPW LAYWWNTQKL FPASSVISFN PAIFSREDMA MIPKFASRPC TSQARQQGEH ESLHRDMTVG FGKWGWSPLE
301: MENPFPAGEA DVHLWHGAED LIVPVSLSRY IAERLPWVRY HELPTAGHLF PVADGMGDVI LRTMLLEEN

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.