Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014829.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 99.71 | 99.71 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 99.43 | 99.43 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 89.71 | 89.71 |
| CDX78221 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.0 | 64.71 |
| VIT_13s0106g00780.t01 | Wine grape | mitochondrion | 57.14 | 53.48 |
| CDX75055 | Canola | plastid | 51.14 | 49.31 |
| TraesCS6B01G191000.1 | Wheat | plastid | 51.71 | 49.05 |
| HORVU6Hr1G033060.1 | Barley | plastid | 51.43 | 48.78 |
| CDX84140 | Canola | plastid | 50.57 | 48.76 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 50.57 | 48.76 |
| TraesCS6D01G152300.1 | Wheat | plastid | 51.43 | 48.52 |
| CDY49719 | Canola | extracellular | 47.43 | 48.4 |
| TraesCS6A01G160400.1 | Wheat | plastid | 51.14 | 48.25 |
| EES05176 | Sorghum | plastid | 50.57 | 48.23 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 49.14 | 47.78 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 46.86 | 47.67 |
| Os02t0532300-02 | Rice | plasma membrane | 50.57 | 47.58 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 49.14 | 47.25 |
| CDY72669 | Canola | cytosol | 16.86 | 47.2 |
| CDY70769 | Canola | cytosol | 16.86 | 47.2 |
| GSMUA_Achr11P... | Banana | mitochondrion | 49.43 | 46.63 |
| PGSC0003DMT400061630 | Potato | endoplasmic reticulum, extracellular, golgi | 47.14 | 46.48 |
| OQU81513 | Sorghum | cytosol | 27.14 | 46.34 |
| TraesCS1D01G269000.1 | Wheat | plastid | 46.86 | 44.69 |
| CDY39579 | Canola | cytosol, endoplasmic reticulum, peroxisome | 47.43 | 44.5 |
| TraesCS2A01G294400.1 | Wheat | plastid | 45.71 | 44.44 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 45.71 | 44.44 |
| Solyc11g007040.1.1 | Tomato | plastid | 51.43 | 44.44 |
| PGSC0003DMT400060120 | Potato | extracellular, golgi, vacuole | 43.14 | 44.28 |
| EES04288 | Sorghum | extracellular | 45.43 | 44.17 |
| TraesCS2D01G292100.1 | Wheat | plastid | 45.43 | 44.17 |
| Solyc05g055290.2.1 | Tomato | extracellular, golgi | 43.71 | 44.09 |
| HORVU1Hr1G074380.4 | Barley | golgi | 46.0 | 43.87 |
| CDX77906 | Canola | cytosol, golgi, peroxisome | 46.86 | 43.85 |
| Os04t0412000-01 | Rice | plasma membrane | 48.86 | 43.62 |
| CDX88793 | Canola | extracellular, golgi | 42.57 | 43.57 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 47.14 | 43.54 |
| PGSC0003DMT400061634 | Potato | plastid | 50.86 | 43.41 |
| CDY21822 | Canola | cytosol, golgi, peroxisome | 47.14 | 43.31 |
| CDX92349 | Canola | endoplasmic reticulum, golgi | 42.0 | 43.24 |
| CDY26931 | Canola | endoplasmic reticulum, extracellular | 42.0 | 43.24 |
| CDY09141 | Canola | endoplasmic reticulum, golgi | 41.43 | 42.52 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 44.86 | 42.2 |
| Zm00001d003800_P011 | Maize | extracellular | 47.43 | 40.59 |
| CDY41508 | Canola | cytosol, endoplasmic reticulum, golgi, mitochondrion | 41.14 | 40.45 |
| TraesCS1A01G268900.1 | Wheat | plastid | 46.57 | 40.35 |
| CDY65628 | Canola | cytosol, golgi, peroxisome | 40.86 | 40.17 |
| CDY68104 | Canola | cytosol | 18.57 | 39.88 |
| Solyc11g007030.1.1 | Tomato | extracellular, mitochondrion | 47.71 | 39.67 |
| CDX71001 | Canola | extracellular | 24.57 | 39.63 |
| CDY60542 | Canola | cytosol | 36.86 | 39.33 |
| CDY67187 | Canola | extracellular, golgi | 36.57 | 38.44 |
| CDY43140 | Canola | extracellular | 36.29 | 38.14 |
| CDY43139 | Canola | extracellular, golgi | 36.0 | 37.84 |
| CDY21213 | Canola | extracellular | 35.43 | 37.24 |
| CDY49935 | Canola | extracellular | 35.14 | 36.94 |
| CDY67186 | Canola | extracellular | 32.86 | 36.39 |
| CDY31156 | Canola | cytosol | 34.0 | 36.17 |
| CDY21214 | Canola | endoplasmic reticulum, golgi, plastid | 36.29 | 36.08 |
| CDY49934 | Canola | endoplasmic reticulum, golgi | 35.71 | 35.51 |
| CDX93573 | Canola | cytosol | 32.0 | 35.22 |
| CDY68922 | Canola | cytosol, mitochondrion | 20.57 | 34.62 |
| CDY30542 | Canola | mitochondrion | 37.14 | 33.77 |
| CDX77121 | Canola | mitochondrion | 19.71 | 32.24 |
| EER89183 | Sorghum | cytosol | 23.14 | 28.42 |
| CDY32828 | Canola | nucleus | 32.86 | 27.58 |
| CDX95073 | Canola | golgi, vacuole | 31.43 | 26.44 |
| CDY35686 | Canola | endoplasmic reticulum, golgi | 42.57 | 26.28 |
| CDY68993 | Canola | plasma membrane | 14.0 | 26.2 |
| CDY71255 | Canola | cytosol | 18.0 | 20.06 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 26.29 | 17.69 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 26.0 | 17.57 |
| CDY10412 | Canola | cytosol | 26.0 | 17.27 |
| CDX70335 | Canola | cytosol | 26.0 | 17.27 |
| CDX77120 | Canola | extracellular | 12.29 | 11.98 |
Protein Annotations
| EnsemblPlants:CDX76158 | EnsemblPlantsGene:GSBRNA2T00126452001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF740 | PFAM:PF12697 | PFscan:PS51257 | ProteinID:CDX76158 | ProteinID:CDX76158.1 |
| SEG:seg | SignalP:SignalP-TM | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI0004EF0CC6 | MapMan:35.2 |
Description
BnaA04g04220D
Coordinates
chrLK031806:-:1445662..1447110
Molecular Weight (calculated)
39408.7 Da
IEP (calculated)
9.404
GRAVY (calculated)
-0.145
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKCLVGGAF IIVLIALGVW AIISCIPPPS KICGTPGGPP ITAPRIRLSD GRYLAYEEHG VSRQNATFKI IFIHAFATFR RDAVIANRVR PGFLEKNGIY
101: VVSYDRPGYG ESDPHSRRSE KTLAHDIEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQTKTERFAM
201: LITHHTPWLL YWWNHQKLFQ TSAVMQSSPT IFSPQDMALL PKLAVRVSYK NQTTQQGVHE SLERDLIVGF GKWGFDPMKI ENPFPKGEGS VHLWQGDDDR
301: LVPIQLQRII AQKLSWIKYH EIPGAGHLFP NADGVAETIL KELLPIPQAS
101: VVSYDRPGYG ESDPHSRRSE KTLAHDIEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQTKTERFAM
201: LITHHTPWLL YWWNHQKLFQ TSAVMQSSPT IFSPQDMALL PKLAVRVSYK NQTTQQGVHE SLERDLIVGF GKWGFDPMKI ENPFPKGEGS VHLWQGDDDR
301: LVPIQLQRII AQKLSWIKYH EIPGAGHLFP NADGVAETIL KELLPIPQAS
001: MKKWLITGAV VIVLIGLGAW AIVSITPPPP KRCGTPGGPP ITAPRIRLSD GRYLAYEEHG VSRQNATFKI VFIHAFSTFR RDAVIANRVR PGFLEKNGIY
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSL3]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.