Factsheet for PGSC0003DMT400061634

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g007040.1.1	Tomato	plastid	91.22	92.35
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	74.88	86.48
VIT_13s0106g00780.t01	Wine grape	mitochondrion	54.88	60.16
PGSC0003DMT400006848	Potato	plastid	53.41	59.19
KRH33274	Soybean	extracellular, golgi, vacuole	48.78	58.31
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	52.2	56.91
GSMUA_Achr11P...	Banana	mitochondrion	50.49	55.8
PGSC0003DMT400006849	Potato	mitochondrion, plastid	49.27	53.16
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	44.15	53.08
PGSC0003DMT400019164	Potato	extracellular, golgi	43.41	52.35
TraesCS6B01G191000.1	Wheat	plastid	47.07	52.3
Os02t0532300-02	Rice	plasma membrane	47.32	52.15
HORVU6Hr1G033060.1	Barley	plastid	46.59	51.76
TraesCS6A01G160400.1	Wheat	plastid	46.59	51.48
TraesCS6D01G152300.1	Wheat	plastid	46.59	51.48
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	43.17	51.45
EES05176	Sorghum	plastid	45.85	51.23
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	43.41	50.86
AT3G54240.1	Thale cress	extracellular, golgi, vacuole	43.41	50.86
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.41	50.86
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	43.41	50.86
TraesCS2D01G292100.1	Wheat	plastid	44.63	50.83
Zm00001d016696_P002	Maize	extracellular, plasma membrane	45.12	50.82
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	44.39	50.56
TraesCS2A01G294400.1	Wheat	plastid	43.66	49.72
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	44.39	48.92
EES04288	Sorghum	extracellular	42.44	48.33
OQU81513	Sorghum	cytosol	23.9	47.8
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	43.9	47.49
TraesCS1D01G269000.1	Wheat	plastid	41.71	46.59
Os04t0412000-01	Rice	plasma membrane	44.15	46.17
HORVU1Hr1G074380.4	Barley	golgi	40.24	44.96
Zm00001d003800_P011	Maize	extracellular	43.9	44.01
TraesCS1A01G268900.1	Wheat	plastid	42.2	42.82
PGSC0003DMT400018400	Potato	extracellular	36.83	42.66
PGSC0003DMT400030589	Potato	extracellular	35.37	40.96
PGSC0003DMT400030553	Potato	cytosol	31.71	40.25
EER89183	Sorghum	cytosol	22.68	32.63
PGSC0003DMT400004379	Potato	cytosol	25.37	19.66
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	22.68	17.13

Protein Annotations

EnsemblPlants:PGSC0003DMT400061634	EnsemblPlantsGene:PGSC0003DMG402023991	EntrezGene:102603000	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF976	PFAM:PF12697	PGSC:PGSC0003DMG402023991	RefSeq:XP_006361463.1
SUPFAM:SSF53474	UniParc:UPI0002968669	UniProt:M1C7T9	MapMan:35.2	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402023991]

Coordinates

chr11:+:5270809..5275725

Molecular Weight (calculated)

46274.5 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.277

Length

410 amino acids

Sequence
(BLAST)

001: MFATTFPTSF GFYVSPFIQT PTLLTSAKSL YSSNKFKFNP KKGLNHLQDS IFCHSNSSQG MLGKVLVVLL IAGLAWAFPA LQPPPPRICG SPDGPTVTGP
101: RIKLRDGRHL AYKEHGVSKE TAKYKVVYAH SFSATKYDSA VAPLETLEEL GAYVVSFDRP GYGESDPHPK RTIQTTALDM EELADQLGLG PKFYVMGYSM
201: GGHSVWGCLK YIPNRLAGAA LVAPVVNYWW PNFPANISTE GYNLQLPQDQ WALRVAHYAP WLVYWWNTQK WFPCNSVISG KPKMSPQDLE VVSKSAKHLS
301: KRPKLKEYAV KQGVFESLHR DMMVGFGKWD FDPMDLKNPF PNGEGSVHLW HGDEDWVVPV MLQRYVAERL PWIQYHEMPN VGHLVMHDPA MNEVIWKTFL
401: TGEEEQIVHS

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.