Factsheet for PGSC0003DMT400006847

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009520.2.1	Tomato	plastid	94.41	94.41
PGSC0003DMT400006848	Potato	plastid	72.07	73.24
VIT_08s0007g03440.t01	Wine grape	plastid	71.01	70.82
KRH30836	Soybean	mitochondrion, plastid	65.43	65.43
KRH32735	Soybean	endoplasmic reticulum	65.16	65.33
KRH67906	Soybean	golgi, plastid	64.1	65.14
PGSC0003DMT400006849	Potato	mitochondrion, plastid	65.16	64.47
KRG96190	Soybean	extracellular, plasma membrane	47.61	62.15
AT2G36290.1	Thale cress	plastid	59.04	60.99
Bra005286.1-P	Field mustard	plastid	58.24	60.33
CDX75055	Canola	plastid	58.24	60.33
AT1G74300.1	Thale cress	extracellular	54.52	59.25
CDX84140	Canola	plastid	56.91	58.95
GSMUA_Achr11P...	Banana	mitochondrion	57.98	58.76
HORVU6Hr1G033060.1	Barley	plastid	55.05	56.1
AT1G74280.1	Thale cress	golgi, mitochondrion	55.05	55.65
AT1G74290.1	Thale cress	mitochondrion	54.79	55.53
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	50.8	55.52
Os02t0532300-02	Rice	plasma membrane	54.52	55.11
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	52.66	55.0
CDX96530	Canola	endoplasmic reticulum, golgi	52.93	54.82
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	52.93	54.82
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	51.33	54.37
Zm00001d016696_P002	Maize	extracellular, plasma membrane	52.39	54.12
EES05176	Sorghum	plastid	52.66	53.95
TraesCS6B01G191000.1	Wheat	plastid	52.66	53.66
TraesCS2D01G292100.1	Wheat	plastid	51.33	53.61
TraesCS2A01G294400.1	Wheat	plastid	51.06	53.33
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	51.06	53.33
TraesCS6D01G152300.1	Wheat	plastid	52.39	53.1
TraesCS6A01G160400.1	Wheat	plastid	52.13	52.83
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	47.87	52.79
VIT_03s0017g02230.t01	Wine grape	cytosol	22.07	52.53
PGSC0003DMT400061634	Potato	plastid	56.91	52.2
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	52.39	51.98
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	50.8	51.34
PGSC0003DMT400019164	Potato	extracellular, golgi	45.48	50.29
OQU81513	Sorghum	cytosol	27.39	50.24
TraesCS1D01G269000.1	Wheat	plastid	47.61	48.77
EES04288	Sorghum	extracellular	46.01	48.06
Os04t0412000-01	Rice	plasma membrane	50.0	47.96
HORVU1Hr1G074380.4	Barley	golgi	45.74	46.87
Zm00001d003800_P011	Maize	extracellular	49.47	45.48
TraesCS1A01G268900.1	Wheat	plastid	47.34	44.06
PGSC0003DMT400030589	Potato	extracellular	36.7	38.98
PGSC0003DMT400018400	Potato	extracellular	36.44	38.7
PGSC0003DMT400030553	Potato	cytosol	32.71	38.08
EER89183	Sorghum	cytosol	24.2	31.93
PGSC0003DMT400004379	Potato	cytosol	26.33	18.71
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	22.61	15.65

Protein Annotations

EnsemblPlants:PGSC0003DMT400006847	EnsemblPlantsGene:PGSC0003DMG400002658	EntrezGene:102582579	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740
PFAM:PF12697	PGSC:PGSC0003DMG400002658	RefSeq:XP_006341134.1	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0002954D3D
UniProt:M0ZS22	MapMan:35.2	:	:	:	:

Description

Esterase/lipase superfamily protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002658]

Coordinates

chr9:+:3184227..3187266

Molecular Weight (calculated)

42078.4 Da

IEP (calculated)

9.025

GRAVY (calculated)

-0.260

Length

376 amino acids

Sequence
(BLAST)

001: MSKKISAASA RSHTRKTEQI KSSIPLPSGM FGKILAVLFV GFVAYAYRAM QPPPSKICGT PDGPPVTSPR IKLSDGRYLA YKEHGVPRDQ AKHKIVFIHG
101: YDSNRHDAVV ATGLSPEVIE SLGVYIVSID RPGYGESDPN PKRTVKSLAF DVQELADQLG LGSKFYVIGF SMGGQAVWTL LKYIPHRLAG AALLAPVTNY
201: WWPNFPANLS KEAFSHQLPQ DIWNLRVAHY LPWLTYWWNT QKFFPACSAA AYNPGALSSQ DLELMPKYRA NTDLYAQVRQ QGQHESLYRD LMIGFGTWEF
301: DPVDLENPFP NKEGSVQLWQ GDEDKLVPVT LQRYIAQRQP WIQYHEIAGA GHMFPVVDGM ADKIVKALLI GEKNVS

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.