Factsheet for PGSC0003DMT400006849

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009510.2.1	Tomato	plastid	97.11	97.11
VIT_08s0007g03440.t01	Wine grape	plastid	66.58	67.11
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	64.47	65.16
PGSC0003DMT400006848	Potato	plastid	61.84	63.51
KRH30836	Soybean	mitochondrion, plastid	61.05	61.7
KRH67906	Soybean	golgi, plastid	59.21	60.81
KRH32735	Soybean	endoplasmic reticulum	60.0	60.8
GSMUA_Achr11P...	Banana	mitochondrion	58.16	59.57
AT1G74300.1	Thale cress	extracellular	54.21	59.54
CDX75055	Canola	plastid	55.26	57.85
Bra005286.1-P	Field mustard	plastid	55.26	57.85
CDX84140	Canola	plastid	54.47	57.02
HORVU6Hr1G033060.1	Barley	plastid	55.26	56.91
AT2G36290.1	Thale cress	plastid	54.47	56.87
KRG96190	Soybean	extracellular, plasma membrane	42.37	55.9
CDX96530	Canola	endoplasmic reticulum, golgi	52.63	55.1
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	52.11	55.0
TraesCS6B01G191000.1	Wheat	plastid	53.16	54.74
TraesCS6D01G152300.1	Wheat	plastid	53.42	54.72
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	52.11	54.55
TraesCS6A01G160400.1	Wheat	plastid	52.89	54.18
EES05176	Sorghum	plastid	51.84	53.68
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	48.42	53.49
AT1G74290.1	Thale cress	mitochondrion	52.11	53.37
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	49.47	52.96
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	47.37	52.79
Os02t0532300-02	Rice	plasma membrane	51.58	52.69
AT1G74280.1	Thale cress	golgi, mitochondrion	51.32	52.42
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	49.47	52.22
Zm00001d016696_P002	Maize	extracellular, plasma membrane	50.0	52.2
TraesCS2A01G294400.1	Wheat	plastid	49.21	51.94
TraesCS2D01G292100.1	Wheat	plastid	48.68	51.39
VIT_03s0017g02230.t01	Wine grape	cytosol	20.79	50.0
PGSC0003DMT400061634	Potato	plastid	53.16	49.27
OQU81513	Sorghum	cytosol	26.58	49.27
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	48.16	49.19
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	48.95	49.08
TraesCS1D01G269000.1	Wheat	plastid	46.58	48.23
PGSC0003DMT400019164	Potato	extracellular, golgi	42.89	47.94
Os04t0412000-01	Rice	plasma membrane	49.21	47.7
HORVU1Hr1G074380.4	Barley	golgi	45.26	46.87
EES04288	Sorghum	extracellular	43.16	45.56
Zm00001d003800_P011	Maize	extracellular	47.63	44.25
TraesCS1A01G268900.1	Wheat	plastid	46.58	43.81
PGSC0003DMT400030589	Potato	extracellular	37.37	40.11
PGSC0003DMT400018400	Potato	extracellular	35.79	38.42
PGSC0003DMT400030553	Potato	cytosol	31.84	37.46
EER89183	Sorghum	cytosol	23.42	31.23
PGSC0003DMT400004379	Potato	cytosol	26.58	19.09
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	24.47	17.13

Protein Annotations

EnsemblPlants:PGSC0003DMT400006849	EnsemblPlantsGene:PGSC0003DMG402002659	EntrezGene:102583578	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	PFAM:PF12697	PGSC:PGSC0003DMG402002659	RefSeq:XP_006341137.1
SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000295259B	UniProt:M0ZS24	MapMan:35.2	:

Description

Esterase/lipase superfamily protein [Source:PGSC_GENE;Acc:PGSC0003DMG402002659]

Coordinates

chr9:+:3187908..3193025

Molecular Weight (calculated)

43200.3 Da

IEP (calculated)

8.553

GRAVY (calculated)

-0.238

Length

380 amino acids

Sequence
(BLAST)

001: MAGGATRKIS AASARAHTRK AKQKTYFPLP SGMMRNMVAL FGIVILALIY RAIMPPSPKI CGSPNGPLIT APRVKLSDGR YLTYKENGVP RDQAKHKFVF
101: IHGFDCVRHD VALHTTTSPE LMQSLGIYIV SIDRPGYGES DPHPKRTPKT LALDIEELAD QLELGSKFYV MGFSMGGQAV WGLLKYIPHR LAGAILLTPV
201: TNYWWGSFPA NLTKQAYYEQ LVQDQWTLRI AHYFPWLTYW WNTQKLFPSS SVATGSEDIL LEQDRVLMPI FDSYQSKYRD LVRQQGEYES IHRDLMVGFG
301: TWEFDPMELE NPFPNGEGSV HIWQGDEDGH VPVILQRFIA KKLPWIHYHE MKGGGHMFPW AEGMGDKVMK TFLLGEPFVM

Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)

001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.