CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	endoplasmic reticulum, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49719	Canola	extracellular	89.01	96.79
CDX77906	Canola	cytosol, golgi, peroxisome	80.16	79.95
CDY21822	Canola	cytosol, golgi, peroxisome	80.7	79.0
AT3G48410.2	Thale cress	mitochondrion	81.5	71.19
CDY65628	Canola	cytosol, golgi, peroxisome	63.0	66.01
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	63.0	66.01
CDX75055	Canola	plastid	54.96	56.47
CDX84140	Canola	plastid	54.69	56.2
CDX96530	Canola	endoplasmic reticulum, golgi	53.08	54.55
CDY70769	Canola	cytosol	18.23	54.4
CDY72669	Canola	cytosol	18.23	54.4
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	52.01	53.89
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	44.77	47.71
CDX88793	Canola	extracellular, golgi	43.7	47.66
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	44.5	47.43
CDX92349	Canola	endoplasmic reticulum, golgi	43.16	47.35
CDY09141	Canola	endoplasmic reticulum, golgi	43.16	47.21
CDY26931	Canola	endoplasmic reticulum, extracellular	42.9	47.06
CDY68104	Canola	cytosol	20.38	46.63
CDY60542	Canola	cytosol	39.41	44.82
CDY67187	Canola	extracellular, golgi	38.61	43.24
CDY43139	Canola	extracellular, golgi	38.34	42.94
CDY43140	Canola	extracellular	38.34	42.94
CDY67186	Canola	extracellular	36.19	42.72
CDY49935	Canola	extracellular	38.07	42.64
CDY21213	Canola	extracellular	37.8	42.34
CDY49934	Canola	endoplasmic reticulum, golgi	39.41	41.76
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	39.14	41.48
CDX71001	Canola	extracellular	24.13	41.47
CDX93573	Canola	cytosol	33.24	38.99
CDY68922	Canola	cytosol, mitochondrion	21.18	37.98
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	12.06	37.82
CDY31156	Canola	cytosol	33.24	37.69
CDY30542	Canola	mitochondrion	36.73	35.58
CDX77121	Canola	mitochondrion	20.38	35.51
CDY32828	Canola	nucleus	32.44	29.02
CDY35686	Canola	endoplasmic reticulum, golgi	43.97	28.92
CDX95073	Canola	golgi, vacuole	32.17	28.85
CDY68993	Canola	plasma membrane	13.94	27.81
CDY71255	Canola	cytosol	18.77	22.29
CDY41305	Canola	cytosol, nucleus, plastid	27.08	19.42
CDY22195	Canola	cytosol, nucleus, plastid	26.81	19.3
CDY10412	Canola	cytosol	25.74	18.22
CDX70335	Canola	cytosol	25.47	18.03
CDX77120	Canola	extracellular	10.19	10.59

Protein Annotations

EnsemblPlants:CDY39579	EnsemblPlantsGene:GSBRNA2T00068134001	Gene3D:3.40.50.1820	GO:A0A078HQG6	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740
PFAM:PF12697	ProteinID:CDY39579	ProteinID:CDY39579.1	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0004EE80E6
UniProt:A0A078HQG6	MapMan:35.2	:	:	:	:

Description

BnaCnng09480DBnaCnng09480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQG6]

Coordinates

chrLK032452:-:241487..247926

Molecular Weight (calculated)

41982.9 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.246

Length

373 amino acids

Sequence
(BLAST)

001: MSSEGTDRTN MRAPSAQSHT RNTQGVSSFD FLKAILLVLF VGALAWAYQS IQPPPPKTVG SPDGAAVTAP RIKLRDGRHL AYKEHGIHRD EAKFKIIYIH
101: GFDSSMLDSP FPFFLSPALV DELRIYTVSF DRPGYGESDP DPNRSPRSIA LDVEELADGL GLGPNFYVFG LSMGGEITWA CLQYIPHRLA GAALVAPAIN
201: YWWRNLPGDI TREAFSLMYP ADQWSLRVAH YAPWLTYWWN TQKWFPISNV IAGNPIIFSR QDMEVLSKLG FVSPNRGYTR QQGEYESLHR DLNVGFSGWE
301: FDPLDLKDPF PNKNGSVHLW HGDEDRFVPV KLQSYIASRL PWISYHEISG SGHLLPLVEG MTDKIIKSLL VGE

Best Arabidopsis Sequence Match ( AT3G48410.2 )
(BLAST)

001: MFIYKDKKII KKLALKQRYC YCLTKFSSGK RVRKFPRERG ERMAGEEIER EKKSAASART HTRNNTQQSS SSGYLKTLLL VTFVGVLAWV YQTIQPPPAK
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.