CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	98.3	98.3
CDY49935	Canola	extracellular	84.66	89.49
CDY21213	Canola	extracellular	84.66	89.49
AT3G03230.1	Thale cress	extracellular	76.7	81.08
CDY43140	Canola	extracellular	71.02	75.08
CDY67187	Canola	extracellular, golgi	69.6	73.57
CDY67186	Canola	extracellular	65.91	73.42
CDY43139	Canola	extracellular, golgi	69.32	73.27
CDY72669	Canola	cytosol	19.03	53.6
CDY70769	Canola	cytosol	18.75	52.8
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	48.01	50.3
CDX92349	Canola	endoplasmic reticulum, golgi	46.31	47.94
CDY09141	Canola	endoplasmic reticulum, golgi	46.31	47.8
CDX88793	Canola	extracellular, golgi	46.02	47.37
CDY26931	Canola	endoplasmic reticulum, extracellular	45.74	47.35
VIT_06s0080g00310.t01	Wine grape	extracellular	46.02	46.15
PGSC0003DMT400019164	Potato	extracellular, golgi	43.75	45.29
EES15681	Sorghum	golgi, plasma membrane, vacuole	42.9	43.52
TraesCS5D01G136100.2	Wheat	golgi	42.05	42.65
Os12t0152100-01	Rice	plasma membrane	41.48	42.57
CDX71001	Canola	extracellular	26.14	42.4
TraesCS5A01G128500.2	Wheat	golgi	41.76	42.36
CDY68104	Canola	cytosol	19.32	41.72
CDY49719	Canola	extracellular	40.62	41.69
Os12t0152500-00	Rice	cytosol	18.75	41.51
Solyc11g067260.1.1	Tomato	plastid	43.75	39.9
CDY65628	Canola	cytosol, golgi, peroxisome	40.34	39.89
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	40.34	39.89
Os01t0859200-01	Rice	plasma membrane	38.92	39.48
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.34	39.44
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	41.76	39.41
CDX96530	Canola	endoplasmic reticulum, golgi	40.34	39.12
HORVU5Hr1G042290.8	Barley	golgi	43.18	38.78
CDX77906	Canola	cytosol, golgi, peroxisome	41.19	38.77
CDY21822	Canola	cytosol, golgi, peroxisome	41.48	38.32
CDY60542	Canola	cytosol	35.51	38.11
Zm00001d044704_P018	Maize	plasma membrane	42.33	37.82
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	38.64	37.78
CDX84140	Canola	plastid	37.78	36.64
CDX75055	Canola	plastid	37.78	36.64
EES01786	Sorghum	endoplasmic reticulum, extracellular	37.5	36.16
CDX77121	Canola	mitochondrion	21.88	35.98
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	35.51	35.71
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	35.23	35.43
CDY31156	Canola	cytosol	32.39	34.65
CDX93573	Canola	cytosol	30.97	34.28
CDY30542	Canola	mitochondrion	35.51	32.47
CDY35686	Canola	endoplasmic reticulum, golgi	46.02	28.57
CDY68922	Canola	cytosol, mitochondrion	16.76	28.37
CDY32828	Canola	nucleus	31.53	26.62
CDX95073	Canola	golgi, vacuole	29.83	25.24
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	7.1	21.01
CDY68993	Canola	plasma membrane	11.08	20.86
CDY41305	Canola	cytosol, nucleus, plastid	23.58	15.96
CDY10412	Canola	cytosol	23.86	15.94
CDY71255	Canola	cytosol	14.2	15.92
CDY22195	Canola	cytosol, nucleus, plastid	23.3	15.83
CDX70335	Canola	cytosol	23.3	15.56
CDX77120	Canola	extracellular	10.23	10.03

Protein Annotations

EnsemblPlants:CDY49934	EnsemblPlantsGene:GSBRNA2T00094101001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	ProteinID:CDY49934	ProteinID:CDY49934.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EDDD5F	UniProt:A0A078IKH5	MapMan:35.2	:	:

Description

BnaCnng18440DBnaCnng18440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKH5]

Coordinates

chrLK032869:-:45920..47694

Molecular Weight (calculated)

40979.6 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.297

Length

352 amino acids

Sequence
(BLAST)

001: MFKPEFYFTL TISPKSSGHM MLLLLAIVGL TSYYVYKLIK PPPPIPLLEN VTKKSPRIKL SDGRHIAYKE LGFPKDEAKN KIIVIHGYAN SKDVDLYTTQ
101: EMIDEFKIYF LFFDRAGYGE SDPNPSRTLK TDTYDIEELA DKLQLGPRFH VLGMSLGAYP VYGCLKYIPH RLSGASLAVP LINFWWRRIP QNLLNAAIKK
201: LPFEFQMTLR VAHYCPWLLY WWMTQKWFPS NRDPKKTLTE RDIELSETYS KQSYKDAVLR QGEYVSSQRD IIAGYGNWEF DPTELSNPFS DTNKGSVHIW
301: CALDDKQILR DVLVYICDKL PWIKFHEVPH AGHWIIHEKK HFEAIIKAAC TE

Best Arabidopsis Sequence Match ( AT3G03230.1 )
(BLAST)

001: MVLLLVIVGL ISYYVYKSIT PPPPIPLPEN VSEISPRIKL NDGRHLAYKE LGFPKDKAKN KIIIVHGNGN SKDVDLYITQ EMIDEFKIYF LFFDRAGYGE
101: SDPNPTRTLK TDTYDIEELA DKLQVGPKFH VIGMSLGAYP VYGCLKYIPN RLSGASLVVP LVNFWWSRVP QNLLNAAMKK LPIGFQLTLR VAHYSPWLLY
201: WWMTQKWFPN SRNPKDTMTE RDLELAEKHT KHSYIKESAL RQGGYVTTQQ DIIAGYGNWE FDPTELKNPF SDSNKGSVHM WCALEDKQIS RDVLLYICDK
301: LPWIKLHEVP DGGHYIIHEK RHFEAIIKAA CSD

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9P1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.