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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15681 Sorghum golgi, plasma membrane, vacuole 87.17 86.17
TraesCS5A01G128500.2 Wheat golgi 84.55 83.57
TraesCS5D01G136100.2 Wheat golgi 84.55 83.57
HORVU5Hr1G042290.8 Barley golgi 85.13 74.49
Zm00001d044704_P018 Maize plasma membrane 83.97 73.1
Os12t0152500-00 Rice cytosol 28.57 61.64
VIT_06s0080g00310.t01 Wine grape extracellular 57.73 56.41
KRH26627 Soybean endoplasmic reticulum, extracellular, golgi 55.1 56.25
PGSC0003DMT400019164 Potato extracellular, golgi 53.64 54.12
Os01t0859200-01 Rice plasma membrane 54.23 53.6
AT5G22460.1 Thale cress endoplasmic reticulum 50.73 51.18
CDX92349 Canola endoplasmic reticulum, golgi 50.15 50.59
Bra002413.1-P Field mustard endoplasmic reticulum, golgi 49.85 50.29
CDY26931 Canola endoplasmic reticulum, extracellular 49.56 50.0
CDY09141 Canola endoplasmic reticulum, golgi 49.27 49.56
CDX88793 Canola extracellular, golgi 49.27 49.42
Bra006627.1-P Field mustard extracellular, golgi 49.27 49.42
Solyc11g067260.1.1 Tomato plastid 54.81 48.7
CDX71001 Canola extracellular 30.61 48.39
Bra020194.1-P Field mustard cytosol 37.03 48.11
Os04t0411800-01 Rice endoplasmic reticulum, golgi 47.81 47.67
Os10t0521400-01 Rice cytosol 48.98 47.46
AT3G03240.1 Thale cress extracellular 44.61 45.95
Os03t0116300-01 Rice cytosol 47.23 45.38
CDY67187 Canola extracellular, golgi 44.02 45.35
AT3G03230.1 Thale cress extracellular 44.02 45.35
CDY43139 Canola extracellular, golgi 44.02 45.35
Os02t0532300-02 Rice plasma membrane 48.69 44.89
CDY43140 Canola extracellular 43.15 44.44
CDY67186 Canola extracellular 40.23 43.67
CDY49935 Canola extracellular 42.27 43.54
CDY21213 Canola extracellular 41.98 43.24
CDY68104 Canola cytosol 19.83 41.72
Os04t0412000-01 Rice plasma membrane 47.52 41.58
CDY49934 Canola endoplasmic reticulum, golgi 42.57 41.48
CDY21214 Canola endoplasmic reticulum, golgi, plastid 42.57 41.48
Bra021364.1-P Field mustard endoplasmic reticulum, golgi, plastid 42.57 41.48
Os10t0521500-01 Rice endoplasmic reticulum, plasma membrane 41.4 40.23
Os03t0116316-00 Rice plastid 13.99 33.57
CDY35686 Canola endoplasmic reticulum, golgi 48.98 29.63
Bra032005.1-P Field mustard endoplasmic reticulum, extracellular 44.02 23.74
Os03t0288300-01 Rice cytosol, endoplasmic reticulum, peroxisome 32.07 20.52
Os12t0535400-01 Rice cytosol, plasma membrane 8.75 18.63
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.2EntrezGene:4351521ProteinID:ABA95828.1InterPro:AB_hydrolaseEMBL:AK070021
ProteinID:BAF29192.2ProteinID:BAT15920.1ProteinID:EAZ19668.1GO:GO:0003674GO:GO:0003824GO:GO:0016787
InterPro:Hydrolase_4InterPro:IPR029058EnsemblPlantsGene:Os12g0152100EnsemblPlants:Os12t0152100-01PFAM:PF12146PANTHER:PTHR10992
PANTHER:PTHR10992:SF720UniProt:Q2QXL8SUPFAM:SSF53474SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000681A24
RefSeq:XP_015618738.1SEG:seg::::
Description
Alpha/beta hydrolase fold-1 domain containing protein. (Os12t0152100-01)
Coordinates
chr12:+:2571700..2573888
Molecular Weight (calculated)
39365.1 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.143
Length
343 amino acids
Sequence
(BLAST)
001: MVPRILIVLL VVLLGLAFQA ILRPPPQKLC GSPGGPPVTS PRIKLRDGRY LAYREDGVQK DKAKFKIISV HAFDSTKDFP LQVSKELVHE LGIYIVGFDR
101: AGYGESDPNP KRDVKSEALD IEELADQLEL GHKFYVLGVS MGGYSIWGCL QYIPNRLAGA AMVVPIINYW WPSFPAELSR QAFKRLIVPE QRTLWIAHNM
201: PSLLYQWMTQ KWLPSSAAAM RHPEIFSKHD LEVLQKMMAM PLIENKSRQQ GIYESTHRDL LVAFGKWEFD PMNITNPFPQ NEGSVHIWQG YEDRLVLVEL
301: QRYIAQRLPW IQYHEFPEGG HMFMLVDGWT DKIIRALLVG EQL
Best Arabidopsis Sequence Match ( AT3G48410.1 )
(BLAST)
001: MAGEEIEREK KSAASARTHT RNNTQQSSSS GYLKTLLLVT FVGVLAWVYQ TIQPPPAKIV GSPGGPTVTS PRIKLRDGRH LAYTEFGIPR DEAKFKIINI
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.