Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0269000-01 | |
| Os05t0529000-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G09690.1 | Os02t0269000-01 | AT2G20130.1 | 21798944 |
| AT3G09690.1 | Os05t0529000-01 | AT2G20130.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0288300-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 80.75 | 24.25 |
| CDY71255 | Canola | cytosol | 44.1 | 22.61 |
| TraesCS4D01G196900.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.43 | 21.54 |
| TraesCS4B01G196600.1 | Wheat | cytosol, nucleus, plasma membrane | 70.81 | 21.43 |
| TraesCS4A01G108000.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.81 | 21.31 |
| EER95045 | Sorghum | cytosol | 70.19 | 21.24 |
| Zm00001d047749_P001 | Maize | cytosol | 68.32 | 20.91 |
| Zm00001d028727_P001 | Maize | plasma membrane | 67.08 | 20.26 |
| Os03t0116316-00 | Rice | plastid | 17.39 | 19.58 |
| HORVU4Hr1G056700.4 | Barley | plastid | 70.19 | 17.68 |
| VIT_08s0040g02380.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 48.45 | 15.41 |
| GSMUA_Achr9P04350_001 | Banana | endoplasmic reticulum, extracellular, golgi | 48.45 | 15.29 |
| GSMUA_Achr6P33050_001 | Banana | cytosol | 46.58 | 14.91 |
| AT3G09690.1 | Thale cress | cytosol | 46.58 | 14.23 |
| VIT_06s0004g03310.t01 | Wine grape | cytosol | 42.86 | 14.05 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 44.1 | 13.71 |
| CDY10412 | Canola | cytosol | 44.72 | 13.66 |
| Bra009556.1-P | Field mustard | cytosol | 44.72 | 13.66 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 44.1 | 13.65 |
| Bra034078.1-P | Field mustard | cytosol, nucleus, plastid | 44.1 | 13.65 |
| CDX70335 | Canola | cytosol | 44.1 | 13.47 |
| AT5G02970.1 | Thale cress | cytosol | 42.86 | 13.42 |
| PGSC0003DMT400070409 | Potato | cytosol, peroxisome, plastid | 44.72 | 13.26 |
| KRG89038 | Soybean | cytosol, golgi, plastid | 39.75 | 13.2 |
| Solyc09g007380.2.1 | Tomato | cytosol | 42.86 | 13.12 |
| KRH19822 | Soybean | cytosol | 40.99 | 12.94 |
| Solyc11g072440.1.1 | Tomato | cytosol, peroxisome, plastid | 43.48 | 12.94 |
| KRH32415 | Soybean | endoplasmic reticulum | 40.99 | 12.87 |
| PGSC0003DMT400004379 | Potato | cytosol | 42.24 | 12.85 |
| KRH24928 | Soybean | golgi, peroxisome, plasma membrane | 39.75 | 12.45 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 20.5 | 9.59 |
| Os12t0152100-01 | Rice | plasma membrane | 18.63 | 8.75 |
| Os01t0859200-01 | Rice | plasma membrane | 18.01 | 8.36 |
| Os02t0532300-02 | Rice | plasma membrane | 19.25 | 8.33 |
| Os10t0521400-01 | Rice | cytosol | 16.77 | 7.63 |
| Os03t0116300-01 | Rice | cytosol | 16.77 | 7.56 |
| Os04t0412000-01 | Rice | plasma membrane | 18.01 | 7.4 |
| Os10t0521500-01 | Rice | endoplasmic reticulum, plasma membrane | 16.15 | 7.37 |
| Os12t0152500-00 | Rice | cytosol | 3.11 | 3.14 |
Protein Annotations
| EnsemblPlants:Os12t0535400-01 | EnsemblPlantsGene:Os12g0535400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR10992 |
| PANTHER:PTHR10992:SF994 | ProteinID:BAF29953.1 | ProteinID:BAT17461.1 | TMHMM:TMhelix | UniParc:UPI0000DD9EF4 | UniProt:Q0IMW2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to hydrolase, alpha/beta fold family protein. (Os12t0535400-01)
Coordinates
chr12:-:21293012..21296897
Molecular Weight (calculated)
17361.2 Da
IEP (calculated)
8.853
GRAVY (calculated)
0.171
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: CQIHWQAVDP AFGLPPVDPT AQSLAGAEDS ELARRLRGPA VAMGKRLSFM NAYLAEDCNP VRCWVITAAV AFVTLIVLGV GSVDDTPVEL PKKLYIGPPS
101: AKTIQLPDGR HLAYKEQGVT ADRARFSLIA PHYFLSSRLA GIPGIKPSLL EKFGARLVII N
101: AKTIQLPDGR HLAYKEQGVT ADRARFSLIA PHYFLSSRLA GIPGIKPSLL EKFGARLVII N
001: MEEMRRGVPT WQDELASLMD GGLQYDGSPI DLTADTESRS KSSGFESGSG SESVESLKDQ VTGFMKSWGE MLMDLAIGCK DVVQQMVVTD DSFVVRKLRK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.