Factsheet for Os02t0269000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os01t0254000-01
Os01t0338000-01
Os01t0847900-01
Os02t0269000-01
Os05t0200280-01
Os05t0455600-01
Os05t0529000-01
Os06t0225000-00
Os12t0560300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G20130.1	Os02t0269000-01	AT2G20130.1	21798944
AT2G20130.1	Os05t0529000-01	AT2G20130.1	21798944
AT2G20130.1	Os01t0196500-01	AT3G13710.1	21798944
AT2G20130.1	Os05t0200280-01	AT3G13710.1	21798944
AT2G20130.1	Os01t0254000-01	AT4G02080.1	21798944
AT2G20130.1	Os01t0338000-01	AT4G02080.1	21798944
AT2G20130.1	Os06t0225000-00	AT4G02080.1	21798944
AT2G20130.1	Os12t0560300-01	AT4G02080.1	21798944
AT2G20130.1	Os01t0847900-01	AT5G02040.1	21798944
AT2G20130.1	Os05t0455600-01	AT5G02040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016021_P001	Maize	plasma membrane	79.73	83.45
VIT_11s0016g03780.t01	Wine grape	plasma membrane	67.01	73.31
PGSC0003DMT400000833	Potato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	64.26	73.05
Solyc12g007130.1.1	Tomato	plasma membrane	63.57	72.27
CDY69713	Canola	plasma membrane	64.6	72.03
Bra015065.1-P	Field mustard	plasma membrane	64.95	71.86
Os05t0529000-01	Rice	cytosol, peroxisome, plasma membrane	67.01	71.43
KRH48364	Soybean	cytosol, peroxisome, plasma membrane	64.95	71.32
CDY50615	Canola	plasma membrane	63.23	71.04
CDY46483	Canola	plasma membrane	63.92	70.99
GSMUA_Achr10P...	Banana	plasma membrane	66.32	70.96
KRH39309	Soybean	cytosol, peroxisome, plasma membrane	64.6	70.94
AT2G20120.1	Thale cress	plasma membrane	64.6	70.15
Bra013250.1-P	Field mustard	plasma membrane	64.6	70.15
CDX93027	Canola	plasma membrane	64.6	70.15
AT2G20130.1	Thale cress	plasma membrane	61.17	69.53
CDY05723	Canola	plasma membrane	61.86	68.7
CDY31990	Canola	plasma membrane	61.86	67.92
Bra041043.1-P	Field mustard	plasma membrane	61.86	67.92
OQU84787	Sorghum	nucleus, peroxisome, plasma membrane	83.85	67.59
Os05t0437200-01	Rice	cytosol, plasma membrane, vacuole	51.2	57.31
Zm00001d007647_P001	Maize	mitochondrion	27.49	55.56
Zm00001d025321_P001	Maize	mitochondrion	27.15	54.86
Os12t0482600-01	Rice	endoplasmic reticulum, mitochondrion, plastid	33.33	54.49
Os01t0867900-02	Rice	extracellular, plasma membrane	51.55	51.9

Protein Annotations

EnsemblPlants:Os02t0269000-01	EnsemblPlantsGene:Os02g0269000	EntrezGene:4328974	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	InterPro:DUF502	PANTHER:PTHR31876
PANTHER:PTHR31876:SF7	PFAM:PF04367	ProteinID:BAD28633.1	ProteinID:BAF08429.1	ProteinID:BAS78042.1	RefSeq:XP_015623108.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00003CE762	UniProt:Q6ERT7	MapMan:35.1	:

Description

Protein of unknown function DUF502 family protein. (Os02t0269000-01)

Coordinates

chr2:-:9617858..9623804

Molecular Weight (calculated)

32220.6 Da

IEP (calculated)

7.272

GRAVY (calculated)

0.132

Length

291 amino acids

Sequence
(BLAST)

001: MAMGDAKPSA VHIPMPARDR DRDRDRELLL VPPAAVATSA SASASAAGRD SDSDDESKPS SASAAAAAAQ TGREAFHKVV HSWASKKFMT GCVILFPIAV
101: TFYITWWFFR FVDGFFSPIY AHLGINIFGL GFVTSISFIF VVGVFMSSWL GASILGLGEW FIKRMPFVRH IYNASKQISA AISPDQNKHA FKEVVIIRHP
201: RIGEYAFGFI TSEVLLQDYS SEEQMYCVYV PTNHLYIGDI FLVNSSDVIR PNLSVREGIE IVVSGGMSMP QVLSIVETEQ NQWSRMRSSR S

Best Arabidopsis Sequence Match ( AT2G20120.2 )
(BLAST)

001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL

Arabidopsis Description

COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.