Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69713 | Canola | plasma membrane | 93.05 | 92.34 |
| CDX93027 | Canola | plasma membrane | 95.37 | 92.16 |
| CDY46483 | Canola | plasma membrane | 90.35 | 89.31 |
| CDY05723 | Canola | plasma membrane | 79.15 | 78.24 |
| VIT_11s0016g03780.t01 | Wine grape | plasma membrane | 80.31 | 78.2 |
| PGSC0003DMT400000833 | Potato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 76.06 | 76.95 |
| CDY31990 | Canola | plasma membrane | 78.38 | 76.6 |
| GSMUA_Achr6P22910_001 | Banana | plasma membrane | 75.68 | 76.26 |
| Solyc12g007130.1.1 | Tomato | plasma membrane | 75.29 | 76.17 |
| KRH39309 | Soybean | cytosol, peroxisome, plasma membrane | 77.61 | 75.85 |
| KRH48364 | Soybean | cytosol, peroxisome, plasma membrane | 77.61 | 75.85 |
| GSMUA_Achr8P27800_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 76.45 | 72.26 |
| GSMUA_Achr3P15700_001 | Banana | cytosol, peroxisome, plasma membrane | 76.45 | 72.0 |
| GSMUA_Achr10P... | Banana | plasma membrane | 74.9 | 71.32 |
| Os05t0529000-01 | Rice | cytosol, peroxisome, plasma membrane | 73.36 | 69.6 |
| Zm00001d038756_P001 | Maize | cytosol, peroxisome, plasma membrane | 72.2 | 68.5 |
| EES19854 | Sorghum | cytosol, peroxisome, plasma membrane | 72.2 | 68.5 |
| Zm00001d010806_P001 | Maize | cytosol, peroxisome, plasma membrane | 71.43 | 67.77 |
| TraesCS1B01G363400.1 | Wheat | golgi, peroxisome, vacuole | 71.04 | 67.4 |
| TraesCS1D01G351700.1 | Wheat | golgi, peroxisome, plasma membrane | 72.97 | 66.08 |
| TraesCS1A01G348700.1 | Wheat | golgi, peroxisome, plasma membrane | 72.59 | 65.73 |
| Zm00001d016021_P001 | Maize | plasma membrane | 69.5 | 64.75 |
| Os02t0269000-01 | Rice | plasma membrane | 71.04 | 63.23 |
| CDY47858 | Canola | peroxisome | 62.16 | 61.92 |
| CDY36483 | Canola | plasma membrane | 61.78 | 61.78 |
| CDY29235 | Canola | peroxisome, plasma membrane, vacuole | 61.78 | 61.78 |
| CDY36014 | Canola | peroxisome | 61.78 | 61.54 |
| CDY51223 | Canola | mitochondrion | 15.44 | 58.82 |
| HORVU1Hr1G081700.1 | Barley | mitochondrion | 72.59 | 55.95 |
| OQU84787 | Sorghum | nucleus, peroxisome, plasma membrane | 69.11 | 49.58 |
| Zm00001d025321_P001 | Maize | mitochondrion | 22.39 | 40.28 |
| Zm00001d007647_P001 | Maize | mitochondrion | 21.62 | 38.89 |
Protein Annotations
| EnsemblPlants:CDY50615 | EnsemblPlantsGene:GSBRNA2T00097143001 | GO:A0A078IHZ2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF502 | PANTHER:PTHR31876 | PANTHER:PTHR31876:SF1 | PFAM:PF04367 | ProteinID:CDY50615 | ProteinID:CDY50615.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE44D4 | UniProt:A0A078IHZ2 | MapMan:35.1 | : |
Description
BnaC03g44060DBnaC03g44060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHZ2]
Coordinates
chrLK032926:-:79172..81028
Molecular Weight (calculated)
29097.3 Da
IEP (calculated)
6.789
GRAVY (calculated)
0.165
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDAKPGIVM ANRDRELLIP VAHSGEDDHD STPKPSPSSS SSSSQETFYK LIRSWASKKF MTGCVILLPM AITFYVTWWF IHFVDGFFSP IYAQLGIDIF
101: GLGFITSITF IFLVGVFMSS WLGTSVLNLG EWFIKRMPFV RHIYNASKQI STAISPDQNT QAFKEVAIIR HPRIGEYAIG FITSTVVLQT YTDEEELCCV
201: YVPTNHLYIG DVFLVNTKDV IRPNLSVREG IEIVVSGGMS MPQVLSTLDM RMAPERSRK
101: GLGFITSITF IFLVGVFMSS WLGTSVLNLG EWFIKRMPFV RHIYNASKQI STAISPDQNT QAFKEVAIIR HPRIGEYAIG FITSTVVLQT YTDEEELCCV
201: YVPTNHLYIG DVFLVNTKDV IRPNLSVREG IEIVVSGGMS MPQVLSTLDM RMAPERSRK
001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL
Arabidopsis Description
COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.