Factsheet for HORVU1Hr1G081700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU1Hr1G072730.1
HORVU1Hr1G081700.1
HORVU3Hr1G018940.2
HORVU3Hr1G035000.2
HORVU3Hr1G045150.3
HORVU3Hr1G085790.1
HORVU7Hr1G080190.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G20130.1	HORVU1Hr1G081700.1	AT2G20130.1	21798944
AT2G20130.1	HORVU1Hr1G028520.1	AT3G13710.1	21798944
AT2G20130.1	HORVU3Hr1G018940.2	AT3G13710.1	21798944
AT2G20130.1	HORVU3Hr1G035000.2	AT4G02080.1	21798944
AT2G20130.1	HORVU3Hr1G045150.3	AT4G02080.1	21798944
AT2G20130.1	HORVU7Hr1G080190.1	AT4G02080.1	21798944
AT2G20130.1	HORVU1Hr1G072730.1	AT5G02040.1	21798944
AT2G20130.1	HORVU3Hr1G085790.1	AT5G02040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G351700.1	Wheat	golgi, peroxisome, plasma membrane	81.85	96.15
TraesCS1A01G348700.1	Wheat	golgi, peroxisome, plasma membrane	81.85	96.15
TraesCS1B01G363400.1	Wheat	golgi, peroxisome, vacuole	76.79	94.51
Zm00001d010806_P001	Maize	cytosol, peroxisome, plasma membrane	70.83	87.18
EES19854	Sorghum	cytosol, peroxisome, plasma membrane	69.64	85.71
Zm00001d038756_P001	Maize	cytosol, peroxisome, plasma membrane	69.05	84.98
Os05t0529000-01	Rice	cytosol, peroxisome, plasma membrane	67.26	82.78
PGSC0003DMT400000833	Potato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	58.04	76.17
Solyc12g007130.1.1	Tomato	plasma membrane	57.74	75.78
VIT_11s0016g03780.t01	Wine grape	plasma membrane	59.52	75.19
GSMUA_Achr6P22910_001	Banana	plasma membrane	57.44	75.1
KRH48364	Soybean	cytosol, peroxisome, plasma membrane	58.33	73.96
KRH39309	Soybean	cytosol, peroxisome, plasma membrane	58.04	73.58
CDY50615	Canola	plasma membrane	55.95	72.59
CDY69713	Canola	plasma membrane	55.95	72.03
Bra015065.1-P	Field mustard	plasma membrane	56.25	71.86
GSMUA_Achr3P15700_001	Banana	cytosol, peroxisome, plasma membrane	58.63	71.64
CDY46483	Canola	plasma membrane	55.65	71.37
GSMUA_Achr8P27800_001	Banana	cytosol, endoplasmic reticulum, nucleus	58.04	71.17
CDX93027	Canola	plasma membrane	56.55	70.9
Bra013250.1-P	Field mustard	plasma membrane	56.55	70.9
AT2G20130.1	Thale cress	plasma membrane	52.38	68.75
AT2G20120.1	Thale cress	plasma membrane	54.76	68.66
CDY05723	Canola	plasma membrane	52.68	67.56
CDY31990	Canola	plasma membrane	52.98	67.17
Bra041043.1-P	Field mustard	plasma membrane	52.98	67.17
HORVU1Hr1G075030.4	Barley	cytosol, peroxisome, plasma membrane	42.86	50.17
HORVU3Hr1G083110.1	Barley	cytosol, peroxisome	45.24	47.65

Protein Annotations

EnsemblPlants:HORVU1Hr1G081700.1	EnsemblPlantsGene:HORVU1Hr1G081700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF502
PANTHER:PTHR31876	PANTHER:PTHR31876:SF1	PFAM:PF04367	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B47D1AF
UniProt:A0A287GH79	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:528031392..528035103

Molecular Weight (calculated)

36717.2 Da

IEP (calculated)

9.984

GRAVY (calculated)

-0.055

Length

336 amino acids

Sequence
(BLAST)

001: GKKKRASRLV SSPLLSPPSC LGRTRHAPHS TAIGRDDPRR PPRADRPPMM GDDKAPRSLS PMGGRDRDRE LLIPVSAAGG GGGSVPRVGV DDDDDLDRTA
101: ASPSASAALS SSGREAFHKV VRSWASKKFM TGCVILFPIA ITFYFTWWFI HFVDGFFSPI YAQLGINIFG LGFITSVTFI FFVGVFMSSW VGASVLGIGE
201: WIIKRMPLVR HIYNASKQIS AAISPDQNKQ AFKEAVIIRH PRIGEYAFGF ITSSVSLQSY SGQEDLYCVY VPTNHLYIGD IFMVNSKDVI RPNLSVREGI
301: EIVVSGGMSM PQILSTLDPH PHPHAIHTDR GGASRS

Best Arabidopsis Sequence Match ( AT2G20120.2 )
(BLAST)

001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL

Arabidopsis Description

COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.