Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013250.1-P | Field mustard | plasma membrane | 100.0 | 100.0 |
| CDY50615 | Canola | plasma membrane | 92.16 | 95.37 |
| CDY69713 | Canola | plasma membrane | 90.3 | 92.72 |
| CDY46483 | Canola | plasma membrane | 87.69 | 89.69 |
| CDY05723 | Canola | plasma membrane | 78.36 | 80.15 |
| VIT_11s0016g03780.t01 | Wine grape | plasma membrane | 79.48 | 80.08 |
| PGSC0003DMT400000833 | Potato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 74.63 | 78.12 |
| GSMUA_Achr6P22910_001 | Banana | plasma membrane | 74.63 | 77.82 |
| Solyc12g007130.1.1 | Tomato | plasma membrane | 73.88 | 77.34 |
| CDY31990 | Canola | plasma membrane | 76.12 | 76.98 |
| KRH48364 | Soybean | cytosol, peroxisome, plasma membrane | 75.75 | 76.6 |
| KRH39309 | Soybean | cytosol, peroxisome, plasma membrane | 75.75 | 76.6 |
| GSMUA_Achr3P15700_001 | Banana | cytosol, peroxisome, plasma membrane | 75.37 | 73.45 |
| GSMUA_Achr8P27800_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 73.88 | 72.26 |
| GSMUA_Achr10P... | Banana | plasma membrane | 73.13 | 72.06 |
| Os05t0529000-01 | Rice | cytosol, peroxisome, plasma membrane | 72.76 | 71.43 |
| Zm00001d010806_P001 | Maize | cytosol, peroxisome, plasma membrane | 70.52 | 69.23 |
| Zm00001d038756_P001 | Maize | cytosol, peroxisome, plasma membrane | 70.52 | 69.23 |
| EES19854 | Sorghum | cytosol, peroxisome, plasma membrane | 70.52 | 69.23 |
| TraesCS1B01G363400.1 | Wheat | golgi, peroxisome, vacuole | 69.03 | 67.77 |
| TraesCS1A01G348700.1 | Wheat | golgi, peroxisome, plasma membrane | 70.15 | 65.73 |
| TraesCS1D01G351700.1 | Wheat | golgi, peroxisome, plasma membrane | 70.15 | 65.73 |
| Zm00001d016021_P001 | Maize | plasma membrane | 67.16 | 64.75 |
| Os02t0269000-01 | Rice | plasma membrane | 70.15 | 64.6 |
| CDY36483 | Canola | plasma membrane | 61.19 | 63.32 |
| CDY29235 | Canola | peroxisome, plasma membrane, vacuole | 60.82 | 62.93 |
| CDY47858 | Canola | peroxisome | 60.45 | 62.31 |
| CDY36014 | Canola | peroxisome | 59.7 | 61.54 |
| CDY51223 | Canola | mitochondrion | 14.93 | 58.82 |
| HORVU1Hr1G081700.1 | Barley | mitochondrion | 70.9 | 56.55 |
| OQU84787 | Sorghum | nucleus, peroxisome, plasma membrane | 67.54 | 50.14 |
| Zm00001d025321_P001 | Maize | mitochondrion | 21.64 | 40.28 |
| Zm00001d007647_P001 | Maize | mitochondrion | 20.15 | 37.5 |
Protein Annotations
| EnsemblPlants:CDX93027 | EnsemblPlantsGene:GSBRNA2T00154919001 | GO:A0A078DVY6 | InterPro:DUF502 | PANTHER:PTHR31876 | PANTHER:PTHR31876:SF1 |
| PFAM:PF04367 | ProteinID:CDX93027 | ProteinID:CDX93027.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002540823 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g37490D
Coordinates
chrLK031874:-:783307..785146
Molecular Weight (calculated)
30060.3 Da
IEP (calculated)
6.512
GRAVY (calculated)
0.115
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDAKPGIVM ANRDRELLIP VAHSGEDDDH DSTPKPSPSS SSSSSSSQET FYKLIRSWAS KKFMTGCVIL LPMAITFYVT WWFIHFVDGF FSPIYAQLGI
101: DIFGLGFITS ITFIFLVGVF MSSWLGTSVL NLGEWFIKRM PFVRHIYNAS KQISTAISPD QNTQAFKEVA IIRHPRIGEY AIGFITSTVV LQTYTDEEEL
201: CCVYVPTNHL YIGDVFLVNT KDVIRPNLSV REGIEIVVSG GMSMPQVLST LDMRMAPERS RSSRVERS
101: DIFGLGFITS ITFIFLVGVF MSSWLGTSVL NLGEWFIKRM PFVRHIYNAS KQISTAISPD QNTQAFKEVA IIRHPRIGEY AIGFITSTVV LQTYTDEEEL
201: CCVYVPTNHL YIGDVFLVNT KDVIRPNLSV REGIEIVVSG GMSMPQVLST LDMRMAPERS RSSRVERS
001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL
Arabidopsis Description
COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.