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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31990 Canola plasma membrane 95.8 94.72
AT2G20120.1 Thale cress plasma membrane 91.22 89.18
AT2G20130.1 Thale cress plasma membrane 83.21 85.16
CDY50615 Canola plasma membrane 78.24 79.15
CDX93027 Canola plasma membrane 80.15 78.36
CDY69713 Canola plasma membrane 77.48 77.78
VIT_11s0016g03780.t01 Wine grape plasma membrane 78.63 77.44
GSMUA_Achr6P22910_001 Banana plasma membrane 75.57 77.04
CDY46483 Canola plasma membrane 76.72 76.72
PGSC0003DMT400000833 Potato endoplasmic reticulum, peroxisome, plasma membrane, plastid 74.43 76.17
Solyc12g007130.1.1 Tomato plasma membrane 74.05 75.78
GSMUA_Achr3P15700_001 Banana cytosol, peroxisome, plasma membrane 75.95 72.36
KRH48364 Soybean cytosol, peroxisome, plasma membrane 72.9 72.08
KRH39309 Soybean cytosol, peroxisome, plasma membrane 72.9 72.08
GSMUA_Achr8P27800_001 Banana cytosol, endoplasmic reticulum, nucleus 74.05 70.8
GSMUA_Achr10P... Banana plasma membrane 71.37 68.75
Os05t0529000-01 Rice cytosol, peroxisome, plasma membrane 70.99 68.13
Zm00001d038756_P001 Maize cytosol, peroxisome, plasma membrane 70.61 67.77
EES19854 Sorghum cytosol, peroxisome, plasma membrane 70.23 67.4
Zm00001d010806_P001 Maize cytosol, peroxisome, plasma membrane 70.23 67.4
CDY36483 Canola plasma membrane 63.36 64.09
TraesCS1B01G363400.1 Wheat golgi, peroxisome, vacuole 66.41 63.74
CDY29235 Canola peroxisome, plasma membrane, vacuole 62.98 63.71
Zm00001d016021_P001 Maize plasma membrane 66.41 62.59
TraesCS1D01G351700.1 Wheat golgi, peroxisome, plasma membrane 67.56 61.89
Os02t0269000-01 Rice plasma membrane 68.7 61.86
TraesCS1A01G348700.1 Wheat golgi, peroxisome, plasma membrane 67.18 61.54
CDY51223 Canola mitochondrion 15.27 58.82
CDY47858 Canola peroxisome 57.25 57.69
CDY36014 Canola peroxisome 56.49 56.92
HORVU1Hr1G081700.1 Barley mitochondrion 67.56 52.68
OQU84787 Sorghum nucleus, peroxisome, plasma membrane 66.79 48.48
Zm00001d025321_P001 Maize mitochondrion 20.99 38.19
Zm00001d007647_P001 Maize mitochondrion 19.47 35.42
Protein Annotations
EnsemblPlants:CDY05723EnsemblPlantsGene:GSBRNA2T00120756001GO:A0A078F1J8InterPro:DUF502PANTHER:PTHR31876PANTHER:PTHR31876:SF1
PFAM:PF04367ProteinID:CDY05723ProteinID:CDY05723.1SEG:segTMHMM:TMhelixUniParc:UPI0004EEFD64
MapMan:35.1:::::
Description
BnaC07g00800D
Coordinates
chrLK031964:-:240123..242190
Molecular Weight (calculated)
29182.3 Da
IEP (calculated)
6.393
GRAVY (calculated)
0.257
Length
262 amino acids
Sequence
(BLAST)
001: MGDEKPTVVM ANRERDLELL MPVADKEEGS TSKPSSSSSS HHQASHETLS LFIRGWASKK FMTGCVILLP IAITFYITWW FIHFVDGFFS PIYAQLGINI
101: FGFGFLTSIA FIFLVGVFMS SWLGASVLNL GEWFIKRMPF VRHIYNASKQ ISTAISPDQN TQAFKEVAII RHPRVGEYAF GFITSTVVLQ NYPTEEELCC
201: VYVPTNHLYI GDILLVNSND VIRPNLSVRE GIEIVVSGGM SMPQILSTID KPAASIDRAT SV
Best Arabidopsis Sequence Match ( AT2G20120.2 )
(BLAST)
001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL
Arabidopsis Description
COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.