Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- extracellular 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29235 | Canola | peroxisome, plasma membrane, vacuole | 75.0 | 19.69 |
| CDY36483 | Canola | plasma membrane | 75.0 | 19.69 |
| CDY50615 | Canola | plasma membrane | 58.82 | 15.44 |
| CDY69713 | Canola | plasma membrane | 58.82 | 15.33 |
| CDY05723 | Canola | plasma membrane | 58.82 | 15.27 |
| CDY46483 | Canola | plasma membrane | 58.82 | 15.27 |
| CDY31990 | Canola | plasma membrane | 58.82 | 15.09 |
| CDX93027 | Canola | plasma membrane | 58.82 | 14.93 |
| CDY36014 | Canola | peroxisome | 51.47 | 13.46 |
| CDY47858 | Canola | peroxisome | 51.47 | 13.46 |
Protein Annotations
| EnsemblPlants:CDY51223 | EnsemblPlantsGene:GSBRNA2T00002982001 | InterPro:DUF502 | PANTHER:PTHR31876 | PANTHER:PTHR31876:SF6 | PFAM:PF04367 |
| ProteinID:CDY51223 | ProteinID:CDY51223.1 | UniParc:UPI0004EBBB64 | UniProt:A0A078IQ40 | MapMan:35.1 | : |
Description
BnaC09g09780DBnaC09g09780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ40]
Coordinates
chrLK032976:+:79264..79573
Molecular Weight (calculated)
7666.4 Da
IEP (calculated)
10.234
GRAVY (calculated)
0.075
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSWLRASLL SIGEWSIKKM PLISYIYSAS KQISRAISPE QSSGAFKEVA IIRHHIWENT LLGSLHPL
001: METRERDLER LIPMHKSGAS PRDVVLSVPP SPLASPIHVA GKEAIYKVIR SWASKKFMTG CVILLPIAVT FYFTWWFIHF VDGFFSPIYT HLGINMFGLG
101: FVTSITFIFM VGVFMSSWLG ASVLSIGEWF IKKMPLVSYI YSASKQISGA ISPDQSSGAF KEVAIIRHPH MGEYAFGFIT STVILRGRAG GEELCCVYVP
201: TNHLYLGDIF LISSKDIIRP NLSVREGIEI VISGGMSIPH MLTTLDSETI HRMLESFGIL EFGDVCLSLV LAWT
101: FVTSITFIFM VGVFMSSWLG ASVLSIGEWF IKKMPLVSYI YSASKQISGA ISPDQSSGAF KEVAIIRHPH MGEYAFGFIT STVILRGRAG GEELCCVYVP
201: TNHLYLGDIF LISSKDIIRP NLSVREGIEI VISGGMSIPH MLTTLDSETI HRMLESFGIL EFGDVCLSLV LAWT
Arabidopsis Description
LCV3Protein LIKE COV 3 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.