CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69713	Canola	plasma membrane	96.56	96.93
Bra015065.1-P	Field mustard	plasma membrane	96.95	96.58
CDY50615	Canola	plasma membrane	89.31	90.35
CDX93027	Canola	plasma membrane	89.69	87.69
VIT_11s0016g03780.t01	Wine grape	plasma membrane	78.24	77.07
CDY05723	Canola	plasma membrane	76.72	76.72
CDY31990	Canola	plasma membrane	76.34	75.47
PGSC0003DMT400000833	Potato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	73.66	75.39
GSMUA_Achr6P22910_001	Banana	plasma membrane	73.28	74.71
Solyc12g007130.1.1	Tomato	plasma membrane	72.9	74.61
KRH48364	Soybean	cytosol, peroxisome, plasma membrane	75.19	74.34
KRH39309	Soybean	cytosol, peroxisome, plasma membrane	74.81	73.96
GSMUA_Achr3P15700_001	Banana	cytosol, peroxisome, plasma membrane	75.95	72.36
GSMUA_Achr10P...	Banana	plasma membrane	73.66	70.96
GSMUA_Achr8P27800_001	Banana	cytosol, endoplasmic reticulum, nucleus	72.9	69.71
Os05t0529000-01	Rice	cytosol, peroxisome, plasma membrane	70.61	67.77
Zm00001d038756_P001	Maize	cytosol, peroxisome, plasma membrane	70.23	67.4
EES19854	Sorghum	cytosol, peroxisome, plasma membrane	70.23	67.4
TraesCS1B01G363400.1	Wheat	golgi, peroxisome, vacuole	69.85	67.03
Zm00001d010806_P001	Maize	cytosol, peroxisome, plasma membrane	69.85	67.03
TraesCS1D01G351700.1	Wheat	golgi, peroxisome, plasma membrane	72.14	66.08
TraesCS1A01G348700.1	Wheat	golgi, peroxisome, plasma membrane	71.76	65.73
Zm00001d016021_P001	Maize	plasma membrane	69.08	65.11
CDY36483	Canola	plasma membrane	63.36	64.09
CDY29235	Canola	peroxisome, plasma membrane, vacuole	63.36	64.09
Os02t0269000-01	Rice	plasma membrane	70.99	63.92
CDY47858	Canola	peroxisome	59.92	60.38
CDY36014	Canola	peroxisome	59.16	59.62
CDY51223	Canola	mitochondrion	15.27	58.82
HORVU1Hr1G081700.1	Barley	mitochondrion	71.37	55.65
OQU84787	Sorghum	nucleus, peroxisome, plasma membrane	68.7	49.86
Zm00001d025321_P001	Maize	mitochondrion	22.14	40.28
Zm00001d007647_P001	Maize	mitochondrion	21.37	38.89

Protein Annotations

EnsemblPlants:CDY46483	EnsemblPlantsGene:GSBRNA2T00084076001	GO:A0A078IB47	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF502	PANTHER:PTHR31876	PANTHER:PTHR31876:SF1	PFAM:PF04367	ProteinID:CDY46483	ProteinID:CDY46483.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF3A03	UniProt:A0A078IB47	MapMan:35.1	:

Description

BnaC07g03830DBnaC07g03830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB47]

Coordinates

chrLK032669:+:160045..161679

Molecular Weight (calculated)

29403.5 Da

IEP (calculated)

7.595

GRAVY (calculated)

0.159

Length

262 amino acids

Sequence
(BLAST)

001: MGDAKAGIVM ANRDRELLIP VGEDDNDSTT KPSSSSSHNA GQETFYKLIR SWASKKFMTG CVILLPMAIT FYVTWWFIHF VDGFFSPIYA HLGINLFGLG
101: FITSITFIFF VGVFMSSWLG TSVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR IGEYAIGFIT STLVLQTYSA EEELCCVYVP
201: TNHLYIGDVF LVSTKDVIRP NLSVREGIEI VVSGGMSMPQ VLSTLDIRSP SERSRSSRVE RN

Best Arabidopsis Sequence Match ( AT2G20120.2 )
(BLAST)

001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL

Arabidopsis Description

COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.