Factsheet for Os05t0529000-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os01t0254000-01
Os01t0338000-01
Os01t0847900-01
Os02t0269000-01
Os05t0200280-01
Os05t0455600-01
Os05t0529000-01
Os06t0225000-00
Os12t0560300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G20130.1	Os02t0269000-01	AT2G20130.1	21798944
AT2G20130.1	Os05t0529000-01	AT2G20130.1	21798944
AT2G20130.1	Os01t0196500-01	AT3G13710.1	21798944
AT2G20130.1	Os05t0200280-01	AT3G13710.1	21798944
AT2G20130.1	Os01t0254000-01	AT4G02080.1	21798944
AT2G20130.1	Os01t0338000-01	AT4G02080.1	21798944
AT2G20130.1	Os06t0225000-00	AT4G02080.1	21798944
AT2G20130.1	Os12t0560300-01	AT4G02080.1	21798944
AT2G20130.1	Os01t0847900-01	AT5G02040.1	21798944
AT2G20130.1	Os05t0455600-01	AT5G02040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010806_P001	Maize	cytosol, peroxisome, plasma membrane	88.64	88.64
EES19854	Sorghum	cytosol, peroxisome, plasma membrane	87.55	87.55
Zm00001d038756_P001	Maize	cytosol, peroxisome, plasma membrane	86.81	86.81
TraesCS1B01G363400.1	Wheat	golgi, peroxisome, vacuole	80.22	80.22
VIT_11s0016g03780.t01	Wine grape	plasma membrane	77.29	79.32
TraesCS1A01G348700.1	Wheat	golgi, peroxisome, plasma membrane	82.05	78.32
TraesCS1D01G351700.1	Wheat	golgi, peroxisome, plasma membrane	82.05	78.32
PGSC0003DMT400000833	Potato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	73.26	78.12
GSMUA_Achr6P22910_001	Banana	plasma membrane	73.26	77.82
Solyc12g007130.1.1	Tomato	plasma membrane	72.16	76.95
KRH48364	Soybean	cytosol, peroxisome, plasma membrane	72.53	74.72
KRH39309	Soybean	cytosol, peroxisome, plasma membrane	72.53	74.72
CDY50615	Canola	plasma membrane	69.6	73.36
CDX93027	Canola	plasma membrane	71.43	72.76
Bra013250.1-P	Field mustard	plasma membrane	71.43	72.76
GSMUA_Achr3P15700_001	Banana	cytosol, peroxisome, plasma membrane	72.53	72.0
CDY69713	Canola	plasma membrane	68.5	71.65
AT2G20120.1	Thale cress	plasma membrane	69.96	71.27
Bra015065.1-P	Field mustard	plasma membrane	68.5	71.1
AT2G20130.1	Thale cress	plasma membrane	66.67	71.09
CDY05723	Canola	plasma membrane	68.13	70.99
GSMUA_Achr8P27800_001	Banana	cytosol, endoplasmic reticulum, nucleus	71.06	70.8
CDY46483	Canola	plasma membrane	67.77	70.61
CDY31990	Canola	plasma membrane	68.5	70.57
Bra041043.1-P	Field mustard	plasma membrane	68.5	70.57
HORVU1Hr1G081700.1	Barley	mitochondrion	82.78	67.26
Os02t0269000-01	Rice	plasma membrane	71.43	67.01
Os05t0437200-01	Rice	cytosol, plasma membrane, vacuole	54.21	56.92
Os12t0482600-01	Rice	endoplasmic reticulum, mitochondrion, plastid	33.7	51.69
Os01t0867900-02	Rice	extracellular, plasma membrane	53.85	50.87

Protein Annotations

MapMan:35.1	EntrezGene:4339401	ProteinID:AAU43966.1	EMBL:AK059220	ProteinID:BAF18033.1	ProteinID:BAS95013.1
InterPro:DUF502	ProteinID:EEE64444.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	EMBL:KT935168	EnsemblPlantsGene:Os05g0529000	EnsemblPlants:Os05t0529000-01
PFAM:PF04367	PANTHER:PTHR31876	PANTHER:PTHR31876:SF1	UniProt:Q65XC4	TMHMM:TMhelix	UniParc:UPI000043F458
RefSeq:XP_015639503.1	SEG:seg	:	:	:	:

Description

OsCONTINUOUS VASCULAR RING-LIKE 1, OsCOV-LIKE 1Tonoplast-localized DUF502-containing protein, COV-like protein, Regulation of intracellular auxin transport (Os05t0529000-01)

Coordinates

chr5:-:26279602..26282852

Molecular Weight (calculated)

29860.0 Da

IEP (calculated)

7.619

GRAVY (calculated)

0.172

Length

273 amino acids

Sequence
(BLAST)

001: MGDEKSPLSQ MGSRDRDREL LIPVSGGGSA PGDGDGDGDR AASSSASAAL SSSSREAFHK VVRSWASKKF MTGCVILFPI AITFYITWWF IHFVDGFFSP
101: IYAQLGINMF GLGFITSVTF IFVVGVFMSS WVGASVLSLG EWIIKRMPLV RHIYNASKQI SAAISPDQNK QAFKEVVIIR HPRIGEYAFG FITSSVSLQS
201: YTGQEELYCV YVPTNHLYIG DIFMVNSKDV IRPNLSVREG IEIVVSGGMS MPQILSTLDP QTILGDRTGA SRS

Best Arabidopsis Sequence Match ( AT2G20120.2 )
(BLAST)

001: MGDEKPVIVM ANRERDRELL IPVADSGDKD DGSSSKPSSS SSASSSSHQS SHETLSLFIR GWASKKFMTG CVILLPIAIT FYITWWFIHF VDGFFSPIYA
101: QLGINVFGFG FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT
201: EEELCCVYVP TNHLYIGDLL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTVDKPLA SIDRATSL

Arabidopsis Description

COV1Protein of unknown function (DUF502) [Source:TAIR;Acc:AT2G20120]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.