Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015065.1-P | Field mustard | plasma membrane | 100.0 | 99.24 |
| CDY46483 | Canola | plasma membrane | 96.93 | 96.56 |
| CDY50615 | Canola | plasma membrane | 92.34 | 93.05 |
| CDX93027 | Canola | plasma membrane | 92.72 | 90.3 |
| CDY05723 | Canola | plasma membrane | 77.78 | 77.48 |
| VIT_11s0016g03780.t01 | Wine grape | plasma membrane | 78.93 | 77.44 |
| CDY31990 | Canola | plasma membrane | 77.01 | 75.85 |
| PGSC0003DMT400000833 | Potato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 73.95 | 75.39 |
| GSMUA_Achr6P22910_001 | Banana | plasma membrane | 73.95 | 75.1 |
| KRH48364 | Soybean | cytosol, peroxisome, plasma membrane | 75.86 | 74.72 |
| Solyc12g007130.1.1 | Tomato | plasma membrane | 73.18 | 74.61 |
| KRH39309 | Soybean | cytosol, peroxisome, plasma membrane | 75.48 | 74.34 |
| GSMUA_Achr3P15700_001 | Banana | cytosol, peroxisome, plasma membrane | 76.63 | 72.73 |
| GSMUA_Achr10P... | Banana | plasma membrane | 74.33 | 71.32 |
| GSMUA_Achr8P27800_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 74.33 | 70.8 |
| Zm00001d038756_P001 | Maize | cytosol, peroxisome, plasma membrane | 72.03 | 68.86 |
| EES19854 | Sorghum | cytosol, peroxisome, plasma membrane | 72.03 | 68.86 |
| Zm00001d010806_P001 | Maize | cytosol, peroxisome, plasma membrane | 71.65 | 68.5 |
| Os05t0529000-01 | Rice | cytosol, peroxisome, plasma membrane | 71.65 | 68.5 |
| TraesCS1B01G363400.1 | Wheat | golgi, peroxisome, vacuole | 70.88 | 67.77 |
| TraesCS1D01G351700.1 | Wheat | golgi, peroxisome, plasma membrane | 72.8 | 66.43 |
| TraesCS1A01G348700.1 | Wheat | golgi, peroxisome, plasma membrane | 72.41 | 66.08 |
| Zm00001d016021_P001 | Maize | plasma membrane | 69.73 | 65.47 |
| Os02t0269000-01 | Rice | plasma membrane | 72.03 | 64.6 |
| CDY36483 | Canola | plasma membrane | 63.22 | 63.71 |
| CDY29235 | Canola | peroxisome, plasma membrane, vacuole | 63.22 | 63.71 |
| CDY47858 | Canola | peroxisome | 60.54 | 60.77 |
| CDY36014 | Canola | peroxisome | 59.77 | 60.0 |
| CDY51223 | Canola | mitochondrion | 15.33 | 58.82 |
| HORVU1Hr1G081700.1 | Barley | mitochondrion | 72.03 | 55.95 |
| OQU84787 | Sorghum | nucleus, peroxisome, plasma membrane | 70.11 | 50.69 |
| Zm00001d025321_P001 | Maize | mitochondrion | 22.22 | 40.28 |
| Zm00001d007647_P001 | Maize | mitochondrion | 21.07 | 38.19 |
Protein Annotations
| EnsemblPlants:CDY69713 | EnsemblPlantsGene:GSBRNA2T00091812001 | GO:A0A078JQ50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF502 | PANTHER:PTHR31876 | PANTHER:PTHR31876:SF1 | PFAM:PF04367 | ProteinID:CDY69713 | ProteinID:CDY69713.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDDAE9 | UniProt:A0A078JQ50 | MapMan:35.1 | : |
Description
BnaAnng31300DBnaAnng31300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ50]
Coordinates
chrLK040145:-:638..2240
Molecular Weight (calculated)
29289.4 Da
IEP (calculated)
7.043
GRAVY (calculated)
0.142
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDAKPGIVM ANRDRELLIP VGEDDNDSTP KPSSSSSSAG QETFYKLIRS WASKKFMTGC VILLPMAITF YVTWWFIHFV DGFFSPIYAH LGINIFGLGF
101: ITSITFIFLV GVFMSSWLGT SVLNLGEWFI KRMPFVRHIY NASKQISTAI SPDQNTQAFK EVAIIRHPRI GEYAIGFITS TLVLQTYSDE EELCCVYVPT
201: NHLYIGDVFL VSTKDVIRPN LSVREGIEIV VSGGMSMPQV LSTLDMRSPS ERSRSSRVER N
101: ITSITFIFLV GVFMSSWLGT SVLNLGEWFI KRMPFVRHIY NASKQISTAI SPDQNTQAFK EVAIIRHPRI GEYAIGFITS TLVLQTYSDE EELCCVYVPT
201: NHLYIGDVFL VSTKDVIRPN LSVREGIEIV VSGGMSMPQV LSTLDMRSPS ERSRSSRVER N
001: MANRERDREL LIPVADFGDK DDGSSSKPSS SSSASSSHQS GHETLSLFIR GWASKKFMTG CVILLPIAVT FYTTWWFIHF VDGFFSPIYA LLGINIFGFG
101: FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT EEELCCVYVP
201: TNHLYIGDIL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTLDKPLA SIGNES
101: FLTSIAFIFL VGVFMSSWLG ASVLNLGEWF IKRMPFVRHI YNASKQISTA ISPDQNTQAF KEVAIIRHPR VGEYAFGFIT STVVLQNYPT EEELCCVYVP
201: TNHLYIGDIL LVNSNDVIRP NLSVREGIEI VVSGGMSMPQ ILSTLDKPLA SIGNES
Arabidopsis Description
LCV1Protein LIKE COV 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY49]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.