Factsheet for Os01t0847900-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0254000-01
Os01t0338000-01
Os01t0736900-01
Os02t0265900-01
Os05t0526400-01
Os06t0225000-00
Os06t0503400-01
Os12t0560300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02040.1	Os01t0254000-01	AT1G56330.1	21798944
AT5G02040.1	Os01t0338000-01	AT1G56330.1	21798944
AT5G02040.1	Os06t0225000-00	AT1G56330.1	21798944
AT5G02040.1	Os12t0560300-01	AT1G56330.1	21798944
AT5G02040.1	Os01t0226300-01	AT5G41600.1	21798944
AT5G02040.1	Os01t0736900-01	AT5G41600.1	21798944
AT5G02040.1	Os02t0265900-01	AT5G41600.1	21798944
AT5G02040.1	Os05t0526400-01	AT5G41600.1	21798944
AT5G02040.1	Os06t0503400-01	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03880	Sorghum	cytosol, peroxisome, plasma membrane	90.91	90.91
Os05t0455600-01	Rice	cytosol, peroxisome, vacuole	89.0	89.0
VIT_08s0007g01140.t01	Wine grape	cytosol, peroxisome, vacuole	84.69	84.69
KRH00054	Soybean	cytosol, peroxisome, vacuole	81.82	81.82
KRH49188	Soybean	cytosol, peroxisome, vacuole	81.34	81.34
CDY04976	Canola	cytosol	14.35	81.08
Solyc09g011310.2.1	Tomato	endoplasmic reticulum, peroxisome, vacuole	80.86	80.86
PGSC0003DMT400022726	Potato	endoplasmic reticulum, peroxisome, vacuole	80.86	80.86
Solyc10g084920.1.1	Tomato	cytosol, peroxisome, vacuole	80.38	80.38
PGSC0003DMT400028790	Potato	cytosol, peroxisome, vacuole	80.38	80.38
CDX80799	Canola	cytosol, peroxisome, vacuole	75.6	75.6
CDY55115	Canola	cytosol, peroxisome, vacuole	75.12	75.12
Bra005704.1-P	Field mustard	cytosol, peroxisome, vacuole	75.12	75.12
AT5G02040.1	Thale cress	cytosol, peroxisome, vacuole	72.25	72.25
CDX69570	Canola	endoplasmic reticulum, extracellular	23.45	69.01
AT3G11397.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	68.42	68.42
Zm00001d042866_P001	Maize	cytosol	26.79	68.29
Bra034847.1-P	Field mustard	cytosol, peroxisome, vacuole	67.94	67.94
CDY08532	Canola	endoplasmic reticulum, peroxisome, vacuole	67.46	67.46
CDY14095	Canola	cytosol, peroxisome, vacuole	66.51	66.51
CDY04974	Canola	cytosol, peroxisome, vacuole	66.03	66.03
CDY11345	Canola	cytosol, peroxisome, vacuole	65.55	65.55
CDX80980	Canola	cytosol, peroxisome, vacuole	65.55	65.55
Bra005872.1-P	Field mustard	cytosol, peroxisome, vacuole	65.55	65.55
Bra028745.1-P	Field mustard	cytosol, peroxisome, vacuole	65.07	65.07
AT5G05987.1	Thale cress	cytosol, peroxisome, vacuole	65.07	65.07
CDY53323	Canola	plasma membrane	56.46	63.44
CDX73879	Canola	plastid	37.32	62.4
GSMUA_Achr10P...	Banana	endoplasmic reticulum, nucleus, plasma membrane	21.05	61.11
CDY01015	Canola	cytosol	68.9	49.32
CDY16186	Canola	mitochondrion	46.41	42.17

Protein Annotations

EMBL:AK059798	EMBL:AK073643	EnsemblPlants:Os01t0847900-01	EnsemblPlantsGene:Os01g0847900	EntrezGene:4327478	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR12859	PANTHER:PTHR12859:SF0	PFAM:PF03208
ProteinID:BAD82667.1	ProteinID:BAF06715.2	ProteinID:BAS75218.1	ProteinID:EEE55669.1	RefSeq:XP_015622339.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000049EAD0	UniProt:Q5N791	MapMan:22.8.4.3.1	:	:

Description

Prenylated rab acceptor PRA1 family protein. (Os01t0847900-01);Prenylated rab acceptor PRA1 family protein. (Os01t0847900-02)

Coordinates

chr1:-:36420027..36422866

Molecular Weight (calculated)

24267.7 Da

IEP (calculated)

11.114

GRAVY (calculated)

0.161

Length

209 amino acids

Sequence
(BLAST)

001: MDWSSVTAED LVDALREVDW STPPRPVSEF FSRFTAPRSY SKWTSRLKCN LYYYRTNYFI LIMFILGMGF LRKPVSILAA FSTGLSIAFL NDSFAVTFNE
101: KVTRTVRQFS PHLAAKMRPP LRPVIRGRPS SKRSIHICGR PRWVFVVLFS VVSCFLWMTS CSLLTVLWAL IVGLLATLLH ASFRTPNLKA RLNTFREEFR
201: AVWRNYSEF

Best Arabidopsis Sequence Match ( AT3G11397.1 )
(BLAST)

001: MDWDSVAAED VIEALREVEW SASPRSLAEF FSRFAFPRSF SKWMSRLKCN LYYYRTNYFI LFVFVLGLAL ITRPLAILGA ALTALSLAFL NDSFAATFNE
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Arabidopsis Description

PRA1A3PRA1 family protein A3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W115]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.