Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005704.1-P | Field mustard | cytosol, peroxisome, vacuole | 85.65 | 85.65 |
| CDY55115 | Canola | cytosol, peroxisome, vacuole | 85.65 | 85.65 |
| CDX80799 | Canola | cytosol, peroxisome, vacuole | 84.69 | 84.69 |
| KRH00054 | Soybean | cytosol, peroxisome, vacuole | 80.38 | 80.38 |
| KRH49188 | Soybean | cytosol, peroxisome, vacuole | 79.9 | 79.9 |
| Solyc09g011310.2.1 | Tomato | endoplasmic reticulum, peroxisome, vacuole | 77.99 | 77.99 |
| PGSC0003DMT400022726 | Potato | endoplasmic reticulum, peroxisome, vacuole | 77.99 | 77.99 |
| VIT_08s0007g01140.t01 | Wine grape | cytosol, peroxisome, vacuole | 77.51 | 77.51 |
| Solyc10g084920.1.1 | Tomato | cytosol, peroxisome, vacuole | 76.08 | 76.08 |
| PGSC0003DMT400028790 | Potato | cytosol, peroxisome, vacuole | 76.08 | 76.08 |
| KXG22142 | Sorghum | cytosol, peroxisome, vacuole | 74.16 | 74.16 |
| Zm00001d010055_P003 | Maize | cytosol, peroxisome, vacuole | 73.68 | 73.68 |
| TraesCS1D01G280800.1 | Wheat | cytosol, peroxisome, vacuole | 73.21 | 73.21 |
| TraesCS1B01G290700.1 | Wheat | cytosol, peroxisome, vacuole | 73.21 | 73.21 |
| TraesCS1A01G281600.1 | Wheat | cytosol, peroxisome, vacuole | 73.21 | 73.21 |
| HORVU1Hr1G072730.1 | Barley | cytosol, peroxisome, vacuole | 73.21 | 73.21 |
| Os05t0455600-01 | Rice | cytosol, peroxisome, vacuole | 72.73 | 72.73 |
| Os01t0847900-01 | Rice | cytosol, peroxisome, plasma membrane | 72.25 | 72.25 |
| EES03880 | Sorghum | cytosol, peroxisome, plasma membrane | 72.25 | 72.25 |
| AT3G11397.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 66.03 | 66.03 |
| AT5G05987.1 | Thale cress | cytosol, peroxisome, vacuole | 64.11 | 64.11 |
| Zm00001d042866_P001 | Maize | cytosol | 22.01 | 56.1 |
| TraesCS3B01G395800.1 | Wheat | cytosol, peroxisome, vacuole | 48.33 | 49.51 |
| HORVU3Hr1G085790.1 | Barley | extracellular, plasma membrane | 11.48 | 44.44 |
| TraesCS3A01G363600.1 | Wheat | cytosol, peroxisome, vacuole | 48.33 | 43.35 |
| TraesCS3D01G357100.1 | Wheat | mitochondrion | 49.28 | 41.37 |
| GSMUA_Achr8P02510_001 | Banana | extracellular | 3.35 | 13.73 |
Protein Annotations
| MapMan:22.8.4.3.1 | EntrezGene:831904 | UniProt:A0A178UBN9 | ProteinID:AED90424.1 | ProteinID:AED90425.1 | ArrayExpress:AT5G02040 |
| EnsemblPlantsGene:AT5G02040 | RefSeq:AT5G02040 | TAIR:AT5G02040 | RefSeq:AT5G02040-TAIR-G | EnsemblPlants:AT5G02040.1 | TAIR:AT5G02040.1 |
| EMBL:AY045975 | EMBL:AY054290 | EMBL:AY079325 | EMBL:AY085842 | Unigene:At.20027 | ProteinID:CAB82977.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | RefSeq:NP_195824.1 |
| RefSeq:NP_850753.1 | ProteinID:OAO91090.1 | PFAM:PF03208 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | Symbol:PRA1.A1 | PANTHER:PTHR12859 | PANTHER:PTHR12859:SF0 |
| InterPro:Prenylated_rab_accept_PRA1 | UniProt:Q9LZM7 | TMHMM:TMhelix | UniParc:UPI00000A3CD9 | SEG:seg | : |
Description
PRA1A1PRA1 family protein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM7]
Coordinates
chr5:+:400899..402990
Molecular Weight (calculated)
23834.1 Da
IEP (calculated)
10.967
GRAVY (calculated)
0.148
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWGNVTVDD LFDALREVDW SSPPRPPSEF FSRFTVPKSV PKWDSRLKCN LYYYRTNYFI MIVVILGLGV LTRPLAIFAA LLTALSLAFL NDSFAGSFSE
101: KATRTVRRFS PQLAAKMRPP LTPVTRGRPS SKRAIHVCGQ PRWVFVLTCS LVSFALWYIS SGLLRVSVAL LIAHLATILH ASLRTPNLKA RFNTFREEFR
201: AVWRNYSEI
101: KATRTVRRFS PQLAAKMRPP LTPVTRGRPS SKRAIHVCGQ PRWVFVLTCS LVSFALWYIS SGLLRVSVAL LIAHLATILH ASLRTPNLKA RFNTFREEFR
201: AVWRNYSEI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.