Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, nucleus, plasma membrane | 7.84 | 5.56 |
| GSMUA_Achr8P02500_001 | Banana | extracellular, golgi, peroxisome | 9.8 | 4.72 |
| Bra005704.1-P | Field mustard | cytosol, peroxisome, vacuole | 15.69 | 3.83 |
| Bra005872.1-P | Field mustard | cytosol, peroxisome, vacuole | 15.69 | 3.83 |
| AT5G02040.1 | Thale cress | cytosol, peroxisome, vacuole | 13.73 | 3.35 |
| Bra034847.1-P | Field mustard | cytosol, peroxisome, vacuole | 13.73 | 3.35 |
| AT3G11397.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 13.73 | 3.35 |
| GSMUA_Achr1P17300_001 | Banana | cytosol, peroxisome, plasma membrane | 11.76 | 2.87 |
| Solyc10g084920.1.1 | Tomato | cytosol, peroxisome, vacuole | 11.76 | 2.87 |
| PGSC0003DMT400028790 | Potato | cytosol, peroxisome, vacuole | 11.76 | 2.87 |
| KRH49188 | Soybean | cytosol, peroxisome, vacuole | 11.76 | 2.87 |
| KRH00054 | Soybean | cytosol, peroxisome, vacuole | 11.76 | 2.87 |
| AT5G05987.1 | Thale cress | cytosol, peroxisome, vacuole | 11.76 | 2.87 |
| PGSC0003DMT400022726 | Potato | endoplasmic reticulum, peroxisome, vacuole | 9.8 | 2.39 |
| Bra028745.1-P | Field mustard | cytosol, peroxisome, vacuole | 9.8 | 2.39 |
| Solyc09g011310.2.1 | Tomato | endoplasmic reticulum, peroxisome, vacuole | 9.8 | 2.39 |
| VIT_08s0007g01140.t01 | Wine grape | cytosol, peroxisome, vacuole | 9.8 | 2.39 |
| CDY04976 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02510_001 | EnsemblPlants:GSMUA_Achr8T02510_001 | EnsemblPlantsGene:GSMUA_Achr8G02510_001 | TMHMM:TMhelix | UniParc:UPI0002953A71 | UniProt:M0TM03 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative PRA1 family protein A3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G02510_001]
Coordinates
chr8:+:1807172..1807519
Molecular Weight (calculated)
5599.0 Da
IEP (calculated)
6.160
GRAVY (calculated)
1.151
Length
51 amino acids
Sequence
(BLAST)
(BLAST)
1: MFVLIFSAAS CILWLTTSNL VAVLWALVDG LLATTLNATF QMPNLKAWLN T
001: MDWDSVAAED VIEALREVEW SASPRSLAEF FSRFAFPRSF SKWMSRLKCN LYYYRTNYFI LFVFVLGLAL ITRPLAILGA ALTALSLAFL NDSFAATFNE
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
Arabidopsis Description
PRA1A3PRA1 family protein A3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W115]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.