Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04974 | Canola | cytosol, peroxisome, vacuole | 96.65 | 96.65 |
| CDY14095 | Canola | cytosol, peroxisome, vacuole | 96.17 | 96.17 |
| Bra005872.1-P | Field mustard | cytosol, peroxisome, vacuole | 93.3 | 93.3 |
| AT5G05987.1 | Thale cress | cytosol, peroxisome, vacuole | 92.34 | 92.34 |
| Bra034847.1-P | Field mustard | cytosol, peroxisome, vacuole | 83.73 | 83.73 |
| KRH00054 | Soybean | cytosol, peroxisome, vacuole | 70.33 | 70.33 |
| KRH49188 | Soybean | cytosol, peroxisome, vacuole | 69.86 | 69.86 |
| Solyc09g011310.2.1 | Tomato | endoplasmic reticulum, peroxisome, vacuole | 67.94 | 67.94 |
| PGSC0003DMT400022726 | Potato | endoplasmic reticulum, peroxisome, vacuole | 67.46 | 67.46 |
| Solyc10g084920.1.1 | Tomato | cytosol, peroxisome, vacuole | 66.99 | 66.99 |
| PGSC0003DMT400028790 | Potato | cytosol, peroxisome, vacuole | 66.99 | 66.99 |
| EES03880 | Sorghum | cytosol, peroxisome, plasma membrane | 66.51 | 66.51 |
| KXG22142 | Sorghum | cytosol, peroxisome, vacuole | 66.03 | 66.03 |
| TraesCS1D01G280800.1 | Wheat | cytosol, peroxisome, vacuole | 65.55 | 65.55 |
| TraesCS1B01G290700.1 | Wheat | cytosol, peroxisome, vacuole | 65.55 | 65.55 |
| TraesCS1A01G281600.1 | Wheat | cytosol, peroxisome, vacuole | 65.55 | 65.55 |
| HORVU1Hr1G072730.1 | Barley | cytosol, peroxisome, vacuole | 65.55 | 65.55 |
| Zm00001d010055_P003 | Maize | cytosol, peroxisome, vacuole | 65.55 | 65.55 |
| Bra005704.1-P | Field mustard | cytosol, peroxisome, vacuole | 65.07 | 65.07 |
| Os05t0455600-01 | Rice | cytosol, peroxisome, vacuole | 65.07 | 65.07 |
| Os01t0847900-01 | Rice | cytosol, peroxisome, plasma membrane | 65.07 | 65.07 |
| Zm00001d042866_P001 | Maize | cytosol | 20.1 | 51.22 |
| HORVU3Hr1G085790.1 | Barley | extracellular, plasma membrane | 12.44 | 48.15 |
| TraesCS3B01G395800.1 | Wheat | cytosol, peroxisome, vacuole | 44.98 | 46.08 |
| TraesCS3A01G363600.1 | Wheat | cytosol, peroxisome, vacuole | 46.41 | 41.63 |
| TraesCS3D01G357100.1 | Wheat | mitochondrion | 47.37 | 39.76 |
| GSMUA_Achr8P02510_001 | Banana | extracellular | 2.39 | 9.8 |
Protein Annotations
| EnsemblPlants:Bra028745.1 | EnsemblPlants:Bra028745.1-P | EnsemblPlantsGene:Bra028745 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR12859 | PANTHER:PTHR12859:SF0 | PFAM:PF03208 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002543174 | UniProt:M4EIY0 | MapMan:22.8.4.3.1 | : | : | : |
Description
AT5G05987 (E=2e-104) PRA1.A2 | PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)
Coordinates
chrA02:+:2268256..2269664
Molecular Weight (calculated)
24300.9 Da
IEP (calculated)
10.776
GRAVY (calculated)
0.333
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDNVAAED VIEALREVEW STPPRSLGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVIFVLGLAL ITRPLAIVGT VFTALSIAFL NDSFAATFNE
101: KFIRTIRLFS PHMAAKMRPP HMPVIRGRSA ARKTVYVCGK PRWVFVVIFL TASLVMWFSS CGLLWVLYAF LTSLFVVIVH ASVRTPNLKA RLNTFREEFR
201: AVWRNYSEL
101: KFIRTIRLFS PHMAAKMRPP HMPVIRGRSA ARKTVYVCGK PRWVFVVIFL TASLVMWFSS CGLLWVLYAF LTSLFVVIVH ASVRTPNLKA RLNTFREEFR
201: AVWRNYSEL
001: MDWDNVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVIFVLGLAL VTRPLALVGA ALTALSIAFL NDSFAASFNE
101: KFIRTIRHFS PHMAAKMRPP HMPVIRGRST ARKTVYVCGK PRWVFVITFL TASLVMWFSS CGLLWVLYAL LTSLAVIIVH ASIRTPNLKA RLNTFREEFR
201: AVWRNYSEL
101: KFIRTIRHFS PHMAAKMRPP HMPVIRGRST ARKTVYVCGK PRWVFVITFL TASLVMWFSS CGLLWVLYAL LTSLAVIIVH ASIRTPNLKA RLNTFREEFR
201: AVWRNYSEL
Arabidopsis Description
PRA1A2PRA1 family protein A2 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWC3]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.