Factsheet for HORVU3Hr1G085790.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G082010.3
HORVU3Hr1G030760.2
HORVU3Hr1G035000.2
HORVU3Hr1G045150.3
HORVU3Hr1G069970.2
HORVU7Hr1G075700.2
HORVU7Hr1G080190.1
HORVU7Hr1G081290.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02040.1	HORVU3Hr1G035000.2	AT1G56330.1	21798944
AT5G02040.1	HORVU3Hr1G045150.3	AT1G56330.1	21798944
AT5G02040.1	HORVU7Hr1G080190.1	AT1G56330.1	21798944
AT5G02040.1	HORVU1Hr1G082010.3	AT5G41600.1	21798944
AT5G02040.1	HORVU3Hr1G030760.2	AT5G41600.1	21798944
AT5G02040.1	HORVU3Hr1G069970.2	AT5G41600.1	21798944
AT5G02040.1	HORVU7Hr1G075700.2	AT5G41600.1	21798944
AT5G02040.1	HORVU7Hr1G081290.4	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04976	Canola	cytosol	25.93	37.84
CDX69570	Canola	endoplasmic reticulum, extracellular	38.89	29.58
TraesCS3B01G395800.1	Wheat	cytosol, peroxisome, vacuole	74.07	19.61
CDX73879	Canola	plastid	44.44	19.2
TraesCS3A01G363600.1	Wheat	cytosol, peroxisome, vacuole	81.48	18.88
TraesCS3D01G357100.1	Wheat	mitochondrion	83.33	18.07
Solyc09g011310.2.1	Tomato	endoplasmic reticulum, peroxisome, vacuole	55.56	14.35
PGSC0003DMT400022726	Potato	endoplasmic reticulum, peroxisome, vacuole	55.56	14.35
Solyc10g084920.1.1	Tomato	cytosol, peroxisome, vacuole	53.7	13.88
PGSC0003DMT400028790	Potato	cytosol, peroxisome, vacuole	53.7	13.88
KRH49188	Soybean	cytosol, peroxisome, vacuole	53.7	13.88
KRH00054	Soybean	cytosol, peroxisome, vacuole	53.7	13.88
HORVU1Hr1G072730.1	Barley	cytosol, peroxisome, vacuole	53.7	13.88
VIT_08s0007g01140.t01	Wine grape	cytosol, peroxisome, vacuole	51.85	13.4
CDY14095	Canola	cytosol, peroxisome, vacuole	48.15	12.44
AT3G11397.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	48.15	12.44
CDY04974	Canola	cytosol, peroxisome, vacuole	48.15	12.44
CDX80980	Canola	cytosol, peroxisome, vacuole	48.15	12.44
Bra028745.1-P	Field mustard	cytosol, peroxisome, vacuole	48.15	12.44
AT5G05987.1	Thale cress	cytosol, peroxisome, vacuole	48.15	12.44
CDY53323	Canola	plasma membrane	42.59	12.37
CDY11345	Canola	cytosol, peroxisome, vacuole	46.3	11.96
CDY55115	Canola	cytosol, peroxisome, vacuole	46.3	11.96
CDX80799	Canola	cytosol, peroxisome, vacuole	46.3	11.96
Bra034847.1-P	Field mustard	cytosol, peroxisome, vacuole	46.3	11.96
Bra005872.1-P	Field mustard	cytosol, peroxisome, vacuole	46.3	11.96
Bra005704.1-P	Field mustard	cytosol, peroxisome, vacuole	46.3	11.96
CDY08532	Canola	endoplasmic reticulum, peroxisome, vacuole	44.44	11.48
AT5G02040.1	Thale cress	cytosol, peroxisome, vacuole	44.44	11.48
CDY16186	Canola	mitochondrion	46.3	10.87
CDY01015	Canola	cytosol	46.3	8.56
GSMUA_Achr8P02500_001	Banana	extracellular, golgi, peroxisome	5.56	2.83

Protein Annotations

EnsemblPlants:HORVU3Hr1G085790.1	EnsemblPlantsGene:HORVU3Hr1G085790	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Prenylated_rab_accept_PRA1
PFAM:PF03208	TMHMM:TMhelix	UniParc:UPI000B461FD1	UniProt:A0A287M277	MapMan:35.2	:

Description

PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A287M277]

Coordinates

chrchr3H:-:614246491..614247316

Molecular Weight (calculated)

6536.1 Da

IEP (calculated)

11.258

GRAVY (calculated)

0.463

Length

54 amino acids

Sequence
(BLAST)

1: FAVSWFFLVD LLNLLIVPWA LYVGLLVTLI HASFRERNLK GRLNRFRREF QEAW

Best Arabidopsis Sequence Match ( AT3G11397.1 )
(BLAST)

001: MDWDSVAAED VIEALREVEW SASPRSLAEF FSRFAFPRSF SKWMSRLKCN LYYYRTNYFI LFVFVLGLAL ITRPLAILGA ALTALSLAFL NDSFAATFNE
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Arabidopsis Description

PRA1A3PRA1 family protein A3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W115]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.