Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, nucleus, plasma membrane | 24.53 | 36.11 |
| GSMUA_Achr1P17300_001 | Banana | cytosol, peroxisome, plasma membrane | 51.89 | 26.32 |
| TraesCS3B01G395800.1 | Wheat | cytosol, peroxisome, vacuole | 38.68 | 20.1 |
| TraesCS3A01G363600.1 | Wheat | cytosol, peroxisome, vacuole | 37.74 | 17.17 |
| TraesCS3D01G357100.1 | Wheat | mitochondrion | 37.74 | 16.06 |
| GSMUA_Achr8P02510_001 | Banana | extracellular | 4.72 | 9.8 |
| HORVU3Hr1G085790.1 | Barley | extracellular, plasma membrane | 2.83 | 5.56 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02500_001 | EnsemblPlants:GSMUA_Achr8T02500_001 | EnsemblPlantsGene:GSMUA_Achr8G02500_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR12859 | PANTHER:PTHR12859:SF0 | PFAM:PF03208 | TMHMM:TMhelix | UniParc:UPI000295B0CD |
| UniProt:M0TM02 | MapMan:22.8.4.3.1 | : | : | : | : |
Description
PRA1 family protein A3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G02500_001]
Coordinates
chr8:+:1805624..1807005
Molecular Weight (calculated)
12574.5 Da
IEP (calculated)
10.499
GRAVY (calculated)
-0.024
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWGRREGGG PVLFPAPHSE FFSRFTFPRS YAKWSSPIKC NLYYYRTNYF ILITFILRKK TTKTIVSAIF LILYSAMLQI LMCDLHSFAV TFDEKMKRTV
101: KRFSPH
101: KRFSPH
001: MDWDSVAAED VIEALREVEW SASPRSLAEF FSRFAFPRSF SKWMSRLKCN LYYYRTNYFI LFVFVLGLAL ITRPLAILGA ALTALSLAFL NDSFAATFNE
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
Arabidopsis Description
PRA1A3PRA1 family protein A3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W115]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.