CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005872.1-P	Field mustard	cytosol, peroxisome, vacuole	100.0	100.0
CDX80980	Canola	cytosol, peroxisome, vacuole	98.56	98.56
CDY14095	Canola	cytosol, peroxisome, vacuole	94.74	94.74
CDY04976	Canola	cytosol	16.75	94.59
CDY04974	Canola	cytosol, peroxisome, vacuole	93.78	93.78
AT5G05987.1	Thale cress	cytosol, peroxisome, vacuole	93.3	93.3
CDY08532	Canola	endoplasmic reticulum, peroxisome, vacuole	84.21	84.21
CDY53323	Canola	plasma membrane	74.16	83.33
CDX73879	Canola	plastid	46.89	78.4
EES03880	Sorghum	cytosol, peroxisome, plasma membrane	66.99	66.99
CDY55115	Canola	cytosol, peroxisome, vacuole	66.03	66.03
HORVU1Hr1G072730.1	Barley	cytosol, peroxisome, vacuole	66.03	66.03
KXG22142	Sorghum	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1A01G281600.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1B01G290700.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1D01G280800.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
CDX80799	Canola	cytosol, peroxisome, vacuole	65.55	65.55
Os01t0847900-01	Rice	cytosol, peroxisome, plasma membrane	65.55	65.55
Os05t0455600-01	Rice	cytosol, peroxisome, vacuole	65.07	65.07
Zm00001d010055_P003	Maize	cytosol, peroxisome, vacuole	64.59	64.59
CDY01015	Canola	cytosol	84.69	60.62
CDX69570	Canola	endoplasmic reticulum, extracellular	20.1	59.15
Zm00001d042866_P001	Maize	cytosol	21.05	53.66
HORVU3Hr1G085790.1	Barley	extracellular, plasma membrane	11.96	46.3
TraesCS3B01G395800.1	Wheat	cytosol, peroxisome, vacuole	44.98	46.08
TraesCS3A01G363600.1	Wheat	cytosol, peroxisome, vacuole	47.37	42.49
TraesCS3D01G357100.1	Wheat	mitochondrion	47.85	40.16
CDY16186	Canola	mitochondrion	43.06	39.13

Protein Annotations

EnsemblPlants:CDY11345	EnsemblPlantsGene:GSBRNA2T00049391001	GO:A0A078FAA6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR12859	PANTHER:PTHR12859:SF0	PFAM:PF03208	ProteinID:CDY11345	ProteinID:CDY11345.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F5D6	UniProt:A0A078FAA6	MapMan:22.8.4.3.1	:

Description

BnaA03g01810DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAA6]

Coordinates

chrLK032010:+:846810..848694

Molecular Weight (calculated)

24178.7 Da

IEP (calculated)

10.776

GRAVY (calculated)

0.306

Length

209 amino acids

Sequence
(BLAST)

001: MDWENVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVILVLGLAL ITRPLAILGA AFTALSLAFL NDSFAASFNE
101: KFIRTIRLFS PHLAAKMRPP HMPVIRGRSA ARKTVYVCGK PRWVFVVTFL TASLVMWFSS CGLLWVLYAF LTSLALIIVH ASVRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Best Arabidopsis Sequence Match ( AT5G05987.1 )
(BLAST)

001: MDWDNVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVIFVLGLAL VTRPLALVGA ALTALSIAFL NDSFAASFNE
101: KFIRTIRHFS PHMAAKMRPP HMPVIRGRST ARKTVYVCGK PRWVFVITFL TASLVMWFSS CGLLWVLYAL LTSLAVIIVH ASIRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Arabidopsis Description

PRA1A2PRA1 family protein A2 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWC3]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.