Factsheet for AT5G05987.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005872.1-P	Field mustard	cytosol, peroxisome, vacuole	93.3	93.3
CDX80980	Canola	cytosol, peroxisome, vacuole	93.3	93.3
CDY11345	Canola	cytosol, peroxisome, vacuole	93.3	93.3
CDY14095	Canola	cytosol, peroxisome, vacuole	92.82	92.82
Bra028745.1-P	Field mustard	cytosol, peroxisome, vacuole	92.34	92.34
CDY04974	Canola	cytosol, peroxisome, vacuole	92.34	92.34
AT3G11397.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	84.21	84.21
KRH00054	Soybean	cytosol, peroxisome, vacuole	70.33	70.33
KRH49188	Soybean	cytosol, peroxisome, vacuole	69.86	69.86
Solyc09g011310.2.1	Tomato	endoplasmic reticulum, peroxisome, vacuole	68.42	68.42
PGSC0003DMT400022726	Potato	endoplasmic reticulum, peroxisome, vacuole	68.42	68.42
Solyc10g084920.1.1	Tomato	cytosol, peroxisome, vacuole	67.46	67.46
PGSC0003DMT400028790	Potato	cytosol, peroxisome, vacuole	67.46	67.46
EES03880	Sorghum	cytosol, peroxisome, plasma membrane	66.99	66.99
TraesCS1B01G290700.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1A01G281600.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
KXG22142	Sorghum	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1D01G280800.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
HORVU1Hr1G072730.1	Barley	cytosol, peroxisome, vacuole	66.03	66.03
Zm00001d010055_P003	Maize	cytosol, peroxisome, vacuole	65.55	65.55
Os01t0847900-01	Rice	cytosol, peroxisome, plasma membrane	65.07	65.07
Os05t0455600-01	Rice	cytosol, peroxisome, vacuole	64.59	64.59
AT5G02040.1	Thale cress	cytosol, peroxisome, vacuole	64.11	64.11
Zm00001d042866_P001	Maize	cytosol	20.57	52.44
HORVU3Hr1G085790.1	Barley	extracellular, plasma membrane	12.44	48.15
TraesCS3B01G395800.1	Wheat	cytosol, peroxisome, vacuole	45.45	46.57
TraesCS3A01G363600.1	Wheat	cytosol, peroxisome, vacuole	46.89	42.06
TraesCS3D01G357100.1	Wheat	mitochondrion	47.85	40.16
GSMUA_Achr8P02510_001	Banana	extracellular	2.87	11.76

Protein Annotations

MapMan:22.8.4.3.1	EntrezGene:830485	UniProt:A0A178UKJ9	EMBL:AB017060	ProteinID:AED90951.1	EMBL:AK118943
ArrayExpress:AT5G05987	EnsemblPlantsGene:AT5G05987	RefSeq:AT5G05987	TAIR:AT5G05987	RefSeq:AT5G05987-TAIR-G	EnsemblPlants:AT5G05987.1
TAIR:AT5G05987.1	Unigene:At.47038	EMBL:BT005581	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0010008
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	RefSeq:NP_850778.1	ProteinID:OAO94060.1	PFAM:PF03208
PO:PO:0000293	Symbol:PRA1.A2	PANTHER:PTHR12859	PANTHER:PTHR12859:SF0	InterPro:Prenylated_rab_accept_PRA1	UniProt:Q8GWC3
TMHMM:TMhelix	UniParc:UPI000000C6BB	SEG:seg	:	:	:

Description

PRA1A2PRA1 family protein A2 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWC3]

Coordinates

chr5:+:1804697..1806850

Molecular Weight (calculated)

24188.7 Da

IEP (calculated)

10.776

GRAVY (calculated)

0.262

Length

209 amino acids

Sequence
(BLAST)

001: MDWDNVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVIFVLGLAL VTRPLALVGA ALTALSIAFL NDSFAASFNE
101: KFIRTIRHFS PHMAAKMRPP HMPVIRGRST ARKTVYVCGK PRWVFVITFL TASLVMWFSS CGLLWVLYAL LTSLAVIIVH ASIRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.