Factsheet for Bra005872.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11345	Canola	cytosol, peroxisome, vacuole	100.0	100.0
Bra028745.1-P	Field mustard	cytosol, peroxisome, vacuole	93.3	93.3
AT5G05987.1	Thale cress	cytosol, peroxisome, vacuole	93.3	93.3
Bra034847.1-P	Field mustard	cytosol, peroxisome, vacuole	85.17	85.17
KRH00054	Soybean	cytosol, peroxisome, vacuole	69.38	69.38
KRH49188	Soybean	cytosol, peroxisome, vacuole	68.9	68.9
Solyc10g084920.1.1	Tomato	cytosol, peroxisome, vacuole	67.46	67.46
Solyc09g011310.2.1	Tomato	endoplasmic reticulum, peroxisome, vacuole	67.46	67.46
PGSC0003DMT400028790	Potato	cytosol, peroxisome, vacuole	67.46	67.46
PGSC0003DMT400022726	Potato	endoplasmic reticulum, peroxisome, vacuole	67.46	67.46
EES03880	Sorghum	cytosol, peroxisome, plasma membrane	66.99	66.99
TraesCS1A01G281600.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
KXG22142	Sorghum	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1B01G290700.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
HORVU1Hr1G072730.1	Barley	cytosol, peroxisome, vacuole	66.03	66.03
TraesCS1D01G280800.1	Wheat	cytosol, peroxisome, vacuole	66.03	66.03
Bra005704.1-P	Field mustard	cytosol, peroxisome, vacuole	66.03	66.03
Os01t0847900-01	Rice	cytosol, peroxisome, plasma membrane	65.55	65.55
Os05t0455600-01	Rice	cytosol, peroxisome, vacuole	65.07	65.07
Zm00001d010055_P003	Maize	cytosol, peroxisome, vacuole	64.59	64.59
Zm00001d042866_P001	Maize	cytosol	21.05	53.66
HORVU3Hr1G085790.1	Barley	extracellular, plasma membrane	11.96	46.3
TraesCS3B01G395800.1	Wheat	cytosol, peroxisome, vacuole	44.98	46.08
TraesCS3A01G363600.1	Wheat	cytosol, peroxisome, vacuole	47.37	42.49
TraesCS3D01G357100.1	Wheat	mitochondrion	47.85	40.16
GSMUA_Achr8P02510_001	Banana	extracellular	3.83	15.69

Protein Annotations

EnsemblPlants:Bra005872.1	EnsemblPlants:Bra005872.1-P	EnsemblPlantsGene:Bra005872	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR12859	PANTHER:PTHR12859:SF0	PFAM:PF03208	SEG:seg	TMHMM:TMhelix
UniParc:UPI000253F5D6	UniProt:M4CNT4	MapMan:22.8.4.3.1	:	:	:

Description

AT5G05987 (E=5e-099) PRA1.A2 | PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)

Coordinates

chrA03:+:1010731..1012238

Molecular Weight (calculated)

24178.7 Da

IEP (calculated)

10.776

GRAVY (calculated)

0.306

Length

209 amino acids

Sequence
(BLAST)

001: MDWENVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVILVLGLAL ITRPLAILGA AFTALSLAFL NDSFAASFNE
101: KFIRTIRLFS PHLAAKMRPP HMPVIRGRSA ARKTVYVCGK PRWVFVVTFL TASLVMWFSS CGLLWVLYAF LTSLALIIVH ASVRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Best Arabidopsis Sequence Match ( AT5G05987.1 )
(BLAST)

001: MDWDNVAAED VIEALREVEW STPPRSFGEF FSRFAFPRSF SKWKSRLKCN LYYYRTNYFI LVIFVLGLAL VTRPLALVGA ALTALSIAFL NDSFAASFNE
101: KFIRTIRHFS PHMAAKMRPP HMPVIRGRST ARKTVYVCGK PRWVFVITFL TASLVMWFSS CGLLWVLYAL LTSLAVIIVH ASIRTPNLKA RLNTFREEFR
201: AVWRNYSEL

Arabidopsis Description

PRA1A2PRA1 family protein A2 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWC3]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.